RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 PAK5Q9P286 719 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 MTRF1LQ9UGC7 380 aaKnown RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 ANAPC5Q9UJX4 755 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 NEU3Q9UQ49 428 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 PCDHGA7Q9Y5G6 932 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 PCDHGA4Q9Y5G9 962 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 CCDC187A0A096LP49 1063 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 PMS2P1A4D2B8 440 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 C5orf60A6NFR6 353 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 DFFAO00273 331 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 MID1O15344 667 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 NOBOXO60393 691 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 GCATO75600 419 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 TCEA3O75764 348 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ATP5BP06576 529 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 DLDP09622 509 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ZSCAN5DPP0CG00 497 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 CCNCP24863 283 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ELAVL4P26378 380 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 IVDP26440 423 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 HLA-FP30511 346 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 OR1E1P30953 314 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 SLC6A4P31645 630 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 GARSP41250 739 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ADPRHP54922 357 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 GDF10P55107 478 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 CDH4P55283 916 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 YBEYP58557 167 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 PPIDQ08752 370 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ZNF177Q13360 481 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 P3H1Q32P28 736 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ALFQ53S48 1182 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 IZUMO3Q5VZ72 239 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 AFMIDQ63HM1 303 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 EMBQ6PCB8 327 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 PRPF39Q86UA1 669 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 CCDC13Q8IYE1 715 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 AHI1Q8N157 1196 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ATPAF2Q8N5M1 289 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 NPWQ8N729 165 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 HJURPQ8NCD3 748 aaPredicted RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 HDAC11Q96DB2 347 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 TMA16Q96EY4 203 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 CELF6Q96J87 481 aaKnown RBP11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 TSGA13Q96PP4 275 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 DUSP23Q9BVJ7 150 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 SLC39A8Q9C0K1 460 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 TSPYL1Q9H0U9 437 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 SEPT10Q9P0V9 454 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 ACSL6Q9UKU0 697 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 DMTF1Q9Y222 760 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 CHD5Q8TDI0 1954 aa11.13□□□□□ -0.63
VTI1BP2-201ENST00000394154 KIF26BQ2KJY2 2108 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 LRBAP50851 2863 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 LY6G6EA0A0G2JKS1 128 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 TCAF2A6NFQ2 919 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 NEMP2A6NFY4 417 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 RASA4BC9J798 803 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 SMAPO00193 183 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 DNALI1O14645 258 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 RASA4O43374 803 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 RAMP2O60895 175 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 SEC31AO94979 1220 aaKnown RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 GIMD1P0DJR0 217 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 MYBL2P10244 700 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 HOXD9P28356 352 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 SLC5A2P31639 672 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 ITGA8P53708 1063 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 RPS24P62847 133 aaKnown RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 SRSF6Q13247 344 aaKnown RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 STAT4Q14765 748 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 MORF4L2Q15014 288 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 POLD3Q15054 466 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 TGIF1Q15583 401 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 PARP15Q460N3 678 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 MPPE1Q53F39 396 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 MANEAQ5SRI9 462 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 TIGD7Q6NT04 549 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 ARHGEF18Q6ZSZ5 1173 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 PRUNE1Q86TP1 453 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 ADIPOR2Q86V24 386 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 CCDC117Q8IWD4 279 aaPredicted RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 ARHGAP12Q8IWW6 846 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 TP53INP2Q8IXH6 220 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 FAM217AQ8IXS0 508 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 CFAP52Q8N1V2 620 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 GLIS1Q8NBF1 620 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 NETO2Q8NC67 525 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 OR14C36Q8NHC7 312 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 ART4Q93070 314 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 ARRDC3Q96B67 414 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 FMO2Q99518 471 aa11.12□□□□□ -0.63
VTI1BP2-201ENST00000394154 VAT1Q99536 393 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms