RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ALPIP09923 528 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 ARCN1P48444 511 aaKnown RBP13.24□□□□□ -0.29
USP44-202ENST00000393091 EPHB1P54762 984 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 SPARCL1Q14515 664 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 SPANXN3Q5MJ09 141 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 GLT6D1Q7Z4J2 308 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
USP44-202ENST00000393091 PPHLN1Q8NEY8 458 aaKnown RBP13.24□□□□□ -0.29
USP44-202ENST00000393091 RMDN1Q96DB5 314 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 TTLL3Q9Y4R7 772 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 SPAG6O75602 509 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 HNRNPA2B1P22626 353 aaKnown RBP13.24□□□□□ -0.29
USP44-202ENST00000393091 XPAP23025 273 aaPredicted RBP13.24□□□□□ -0.29
USP44-202ENST00000393091 PPP2CBP62714 309 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 PPP2CAP67775 309 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 HIF1AQ16665 826 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 GPR33Q49SQ1 333 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 CCDC38Q502W7 563 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 LYPLAL1Q5VWZ2 237 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 LPCAT2Q7L5N7 544 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 TSPAN33Q86UF1 283 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 OR14C36Q8NHC7 312 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 ABCG8Q9H221 673 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 C6orf106Q9H6K1 298 aaPredicted RBP13.24□□□□□ -0.29
USP44-202ENST00000393091 ERVMER34-1Q9H9K5 563 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 APPL1Q9UKG1 709 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 PILRBQ9UKJ0 227 aa13.24□□□□□ -0.29
USP44-202ENST00000393091 ZCWPW2A0A1B0GU75 182 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 PRR5-ARHGAP8B1AHC4 643 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 PLK4O00444 970 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 LRP3O75074 770 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 CLDN7O95471 211 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 BPIP17213 487 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 BCKDHBP21953 392 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 ADARP55265 1226 aaKnown RBP13.23□□□□□ -0.29
USP44-202ENST00000393091 ARHGEF7Q14155 803 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 WDR45BQ5MNZ6 344 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 DNTTIP2Q5QJE6 756 aaKnown RBP13.23□□□□□ -0.29
USP44-202ENST00000393091 PLA2G2CQ5R387 149 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 PACS1Q6VY07 963 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 PDIK1LQ8N165 341 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 ULK4Q96C45 1275 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 EBF2Q9HAK2 575 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 C1QAP02745 245 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 OLIG2Q13516 323 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 SKIDA1Q1XH10 827 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 MSS51Q4VC12 460 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 CERCAMQ5T4B2 595 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 BIRC7Q96CA5 298 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 NUS1Q96E22 293 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 SYBUQ9NX95 663 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 BPTFQ12830 3046 aa13.23□□□□□ -0.29
USP44-202ENST00000393091 AURKAO14965 403 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 BNIP3LO60238 219 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 GSTM1P09488 218 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 SPAM1P38567 509 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 LMAN1P49257 510 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 GSTM4Q03013 218 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 PEX6Q13608 980 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 GCNT7Q6ZNI0 430 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 CENPUQ71F23 418 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 MFSD2AQ8NA29 543 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 FBXO25Q8TCJ0 367 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 HEXDCQ8WVB3 486 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 TPSD1Q9BZJ3 242 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 MOCS1Q9NZB8 636 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 CNOT6Q9ULM6 557 aaKnown RBP13.22□□□□□ -0.29
USP44-202ENST00000393091 ITM2BQ9Y287 266 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 TRPM6Q9BX84 2022 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 NDUFS2O75306 463 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 CTPS1P17812 591 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 ARNTP27540 789 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 RACK1P63244 317 aaKnown RBP13.22□□□□□ -0.29
USP44-202ENST00000393091 NAB1Q13506 487 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 TYSND1Q2T9J0 566 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 LAIR1Q6GTX8 287 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 TSSK4Q6SA08 328 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 CCNI2Q6ZMN8 369 aaPredicted RBP13.22□□□□□ -0.29
USP44-202ENST00000393091 CEP76Q8TAP6 659 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 FETUBQ9UGM5 382 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 MUC3AQ02505 3323 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 IGLON5A6NGN9 336 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 DLL1O00548 723 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 TNFRSF10CO14798 259 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 RECQL5O94762 991 aaPredicted RBP13.22□□□□□ -0.29
USP44-202ENST00000393091 ABHD2P08910 425 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 CD9P21926 228 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 MGAT1P26572 445 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 AKT2P31751 481 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 FAM193AP78312 1265 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 SLC25A41Q8N5S1 370 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
USP44-202ENST00000393091 GPR26Q8NDV2 337 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms