RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 RING1Q06587 406 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 GRM3Q14832 879 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 CIR1Q86X95 450 aaPredicted RBP18.39■□□□□ 0.53
TRAF3-203ENST00000392745 KLHDC8BQ8IXV7 354 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 ZNF558Q96NG5 402 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 TMEM79Q9BSE2 394 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 C1QTNF1Q9BXJ1 281 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 C11orf49Q9H6J7 331 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 OLAHQ9NV23 265 aa18.39■□□□□ 0.53
TRAF3-203ENST00000392745 CCDC78A2IDD5 438 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 H3BNH8 94 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 GJB5O95377 273 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 PEX11BO96011 259 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 HLA-DQB2P05538 268 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 ARSAP15289 507 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 WDR5P61964 334 aaKnown RBP18.38■□□□□ 0.53
TRAF3-203ENST00000392745 BTG3Q14201 252 aaPredicted RBP18.38■□□□□ 0.53
TRAF3-203ENST00000392745 EML3Q32P44 896 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 MTX3Q5HYI7 312 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 KCNMB4Q86W47 210 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 AUTS2Q8WXX7 1259 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 ASB9Q96DX5 294 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 HMCESQ96FZ2 354 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 TMEM169Q96HH4 297 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 SCYL1Q96KG9 808 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 UNKQ9C0B0 810 aaKnown RBP18.38■□□□□ 0.53
TRAF3-203ENST00000392745 GLOD4Q9HC38 313 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 CHRAC1Q9NRG0 131 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 RBM22Q9NW64 420 aaKnown RBP eCLIP18.38■□□□□ 0.53
TRAF3-203ENST00000392745 TDRKHQ9Y2W6 561 aaKnown RBP18.38■□□□□ 0.53
TRAF3-203ENST00000392745 PCDHGA7Q9Y5G6 932 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 DRGXA6NNA5 263 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 E7ENX8 843 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 J3KR12 359 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 ADSLP30566 484 aaPredicted RBP18.38■□□□□ 0.53
TRAF3-203ENST00000392745 PSME3P61289 254 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 KCTD4Q8WVF5 259 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 FCRL5Q96RD9 977 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 IL22Q9GZX6 179 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 BFARQ9NZS9 450 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 SNX13Q9Y5W8 968 aa18.38■□□□□ 0.53
TRAF3-203ENST00000392745 ZNF840PA6NDX5 716 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 TPP2P29144 1249 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 RALGDSQ12967 914 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 TRIM25Q14258 630 aaKnown RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 PRPSAP1Q14558 356 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 FBXO46Q6PJ61 603 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 FNDC8Q8TC99 324 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 SLCO4A1Q96BD0 722 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 CIB1Q99828 191 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 MCMBPQ9BTE3 642 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 OSBPL11Q9BXB4 747 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 RUVBL2Q9Y230 463 aaKnown RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 SH3BP1Q9Y3L3 701 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 TIMM44O43615 452 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 ATP6V1G1O75348 118 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 HDCP19113 662 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 ATP5C1P36542 298 aaKnown RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 KRT80Q6KB66 452 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 TIGD7Q6NT04 549 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 ZNF554Q86TJ5 538 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 SPATA6LQ8N4H0 392 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 ARMC5Q96C12 935 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-203ENST00000392745 FNIP2Q9P278 1114 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 MYRFQ9Y2G1 1151 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 CROCCQ5TZA2 2017 aa18.37■□□□□ 0.53
TRAF3-203ENST00000392745 BPTFQ12830 3046 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 DLX3O60479 287 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 C8BP07358 591 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 CYP2R1Q6VVX0 501 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 LRRC49Q8IUZ0 686 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 FSTL5Q8N475 847 aaPredicted RBP18.36■□□□□ 0.53
TRAF3-203ENST00000392745 CCNYL1Q8N7R7 359 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 CEP295NLQ96MC4 621 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 VTI1BQ9UEU0 232 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 MID2Q9UJV3 735 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 DNMT3LQ9UJW3 386 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 TLK1Q9UKI8 766 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 AAR2Q9Y312 384 aaKnown RBP18.36■□□□□ 0.53
TRAF3-203ENST00000392745 ANAPC1Q9H1A4 1944 aa18.36■□□□□ 0.53
TRAF3-203ENST00000392745 ENTPD1P49961 510 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 PDAP1Q13442 181 aaKnown RBP18.35■□□□□ 0.53
TRAF3-203ENST00000392745 ZNF460Q14592 562 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 NAPEPLDQ6IQ20 393 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 HMBOX1Q6NT76 420 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 HERC6Q8IVU3 1022 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 KDM1BQ8NB78 822 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 LPGAT1Q92604 370 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 RMND5BQ96G75 393 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-203ENST00000392745 RANBP9Q96S59 729 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 OMDQ99983 421 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 NOL11Q9H8H0 719 aaKnown RBP18.35■□□□□ 0.53
TRAF3-203ENST00000392745 FAF1Q9UNN5 650 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-203ENST00000392745 FIS1Q9Y3D6 152 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 H0YJX3 145 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 COCHO43405 550 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 APOA4P06727 396 aa18.35■□□□□ 0.53
TRAF3-203ENST00000392745 CKMT2P17540 419 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms