RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 CATSPERBQ9H7T0 1116 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 PDFQ9HBH1 243 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 PCSK1NQ9UHG2 260 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 AP4E1Q9UPM8 1137 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 MFHAS1Q9Y4C4 1052 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 RAI2Q9Y5P3 530 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 ATMQ13315 3056 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 COL6A6A6NMZ7 2263 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 AHCTF1Q8WYP5 2266 aa8.43□□□□□ -1.06
TRAV17-201ENST00000390445 CXorf51AA0A1B0GTR3 108 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 CPED1A4D0V7 1026 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 PMS2P1A4D2B8 440 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ANKRD62A6NC57 917 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 NEMP2A6NFY4 417 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ZSCAN5CA6NGD5 496 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 EEF2KO00418 725 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 CSO75390 466 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 MPOP05164 745 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ALPPL2P10696 532 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 SKILP12757 684 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 TCF4P15884 667 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 LIG3P49916 1009 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 THOP1P52888 689 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ADKP55263 362 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 YBEYP58557 167 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 RAD51Q06609 339 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 CCDC173Q0VFZ6 552 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 MAMLD1Q13495 774 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ASIC2Q16515 512 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 PARP15Q460N3 678 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 INO80DQ53TQ3 878 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 KCTD16Q68DU8 428 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 PLEKHA7Q6IQ23 1121 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ZCCHC8Q6NZY4 707 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 Q6ZS46 218 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 EFL1Q7Z2Z2 1120 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 ZNF571Q7Z3V5 609 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 CAMK1DQ8IU85 385 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 PHACTR4Q8IZ21 702 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 UMODL1-AS1Q8N2C9 162 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 NPWQ8N729 165 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 FAM181AQ8N9Y4 354 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 WDR89Q96FK6 387 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 NAF1Q96HR8 494 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 NSMCE3Q96MG7 304 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 NCAPGQ9BPX3 1015 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 LRRC61Q9BV99 259 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 DUSP23Q9BVJ7 150 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 CLPBQ9H078 707 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 CBX8Q9HC52 389 aa8.42□□□□□ -1.06
TRAV17-201ENST00000390445 UBA2Q9UBT2 640 aaPredicted RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 APOBEC3BQ9UH17 382 aaKnown RBP8.42□□□□□ -1.06
TRAV17-201ENST00000390445 A0A1W2PNU3 283 aaPredicted RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 GOLGA6L22H0YM25 854 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 DDX3XO00571 662 aaKnown RBP eCLIP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 MUSKO15146 869 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 FGF10O15520 208 aaPredicted RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 PRAMEF11O60813 436 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 USP12O75317 370 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 PRB1P04280 392 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 C6P13671 934 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 TSHRP16473 764 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 ERCC2P18074 760 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 XPAP23025 273 aaPredicted RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 MIPP30301 263 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 EIF4A3P38919 411 aaKnown RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 PAPOLAP51003 745 aaKnown RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 AIF1P55008 147 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 GABREP78334 506 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 FANCCQ00597 558 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 UGP2Q16851 508 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 WSCD2Q2TBF2 565 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 TBC1D25Q3MII6 688 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 TMEM52BQ4KMG9 183 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 PPP6R3Q5H9R7 873 aaPredicted RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 ERMARDQ5T6L9 678 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 FAXCQ5TGI0 409 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 MACC1Q6ZN28 852 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 ARHGAP12Q8IWW6 846 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 SLC35F3Q8IY50 421 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 MAPK15Q8TD08 544 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 CASKIN2Q8WXE0 1202 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 ASB12Q8WXK4 309 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 TSACCQ96A04 125 aaPredicted RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 FUBP1Q96AE4 644 aaKnown RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 ZNF653Q96CK0 615 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 ARHGEF26Q96DR7 871 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 MEGF10Q96KG7 1140 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 NAP1L5Q96NT1 182 aaPredicted RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 IL12RB2Q99665 862 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 BOCQ9BWV1 1114 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 CPEB1Q9BZB8 566 aaKnown RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 PCDH12Q9NPG4 1184 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 SIRPGQ9P1W8 387 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 MYO1AQ9UBC5 1043 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 SPASTQ9UBP0 616 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 DKK3Q9UBP4 350 aa8.41□□□□□ -1.06
TRAV17-201ENST00000390445 CNOT8Q9UFF9 292 aaKnown RBP8.41□□□□□ -1.06
TRAV17-201ENST00000390445 OR1A2Q9Y585 309 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms