RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 BST2Q10589 180 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 CYP51A1Q16850 503 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 DGUOKQ16854 277 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ZNF699Q32M78 642 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ADPRMQ3LIE5 342 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 GJC2Q5T442 439 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 FBXO16Q8IX29 292 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 DNERQ8NFT8 737 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 RHOXF1Q8NHV9 184 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 NDNFQ8TB73 568 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 HDAC2Q92769 488 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 SPATA17Q96L03 361 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 UBXN10Q96LJ8 280 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 TBCBQ99426 244 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 MEAF6Q9HAF1 191 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 IL1RL2Q9HB29 575 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 LRRC4Q9HBW1 653 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 HPS4Q9NQG7 708 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ZCWPW2A0A1B0GU75 182 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 TTC34A8MYJ7 566 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 GABARAPO95166 117 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 CRYZL1O95825 349 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 LDLRP01130 860 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 IL7RP16871 459 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 EIF2DP41214 584 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ALDH7A1P49419 539 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 STX1BP61266 288 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 VAC14Q08AM6 782 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 CATSPEREQ5SY80 951 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 FAM35AQ86V20 835 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 LYSMD2Q8IV50 215 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 SPERTQ8NA61 448 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 PAPD5Q8NDF8 572 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 PHF10Q8WUB8 498 aaKnown RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 TSNARE1Q96NA8 513 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 HOPXQ9BPY8 73 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 BTBD2Q9BX70 525 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 DTLQ9NZJ0 730 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 GPSM3Q9Y4H4 160 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ANGPTL3Q9Y5C1 460 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 UNCXA6NJT0 531 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 ZNF487B1APH4 448 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TNPO2O14787 897 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 DNAJB5O75953 348 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 HNRNPLP14866 589 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 ITIH1P19827 911 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 SERPINB10P48595 397 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 IST1P53990 364 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 SELPLGQ14242 412 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 GRM3Q14832 879 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 ACAP2Q15057 778 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 DUOXA2Q1HG44 320 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 ANO4Q32M45 955 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 LDLRAD1Q5T700 205 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TMEM135Q86UB9 458 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 RIOX2Q8IUF8 465 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 CENPLQ8N0S6 344 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 LGI2Q8N0V4 545 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 PSMA8Q8TAA3 256 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 OSBPL2Q9H1P3 480 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 CMTM6Q9NX76 183 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 EIF3LQ9Y262 564 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TAF4O00268 1085 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 MDM4O15151 490 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 INPP4BO15327 924 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 UPK1BO75841 260 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 SPNP16150 400 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 ARL2P36404 184 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 CDH8P55286 799 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 OLIG2Q13516 323 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TMEM236Q5W0B7 351 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 OR6B2Q6IFH4 312 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 FAM183BPQ6ZVS7 135 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TBC1D21Q8IYX1 336 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 CPB2Q96IY4 423 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 RPL10LQ96L21 214 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 LGMNQ99538 433 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 BCL7BQ9BQE9 202 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 MAGEB5Q9BZ81 275 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 SLC7A5P2Q9GIP4 190 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 GBA2Q9HCG7 927 aaPredicted RBP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TNFRSF12AQ9NP84 129 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 PDGFCQ9NRA1 345 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 XPR1Q9UBH6 696 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 EVPLQ92817 2033 aa14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 ZFC3H1O60293 1989 aaKnown RBP14.65□□□□□ -0.06
VPS9D1-201ENST00000389386 TCRBV5S2A0A599 114 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 MAGEB16A2A368 324 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 TBKBP1A7MCY6 615 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 M0QYV0 167 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 NDUFS2O75306 463 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 SLC35E2BP0CK96 405 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 SAT1P21673 171 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 PSMB4P28070 264 aa14.65□□□□□ -0.07
VPS9D1-201ENST00000389386 ICAM3P32942 547 aa14.65□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms