RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PRR11Q96HE9 360 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-202ENST00000381208 NAF1Q96HR8 494 aaKnown RBP12.98□□□□□ -0.33
RPAIN-202ENST00000381208 TMEM168Q9H0V1 697 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 DPEP2Q9H4A9 486 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 AKAP7Q9P0M2 348 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-202ENST00000381208 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 BPTFQ12830 3046 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 CCNB1P14635 433 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 TCF4P15884 667 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 GM2AP17900 193 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 GARSP41250 739 aaKnown RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 RPL26P61254 145 aaKnown RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 CCL7P80098 99 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 VAC14Q08AM6 782 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 GALNT2Q10471 571 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 TRAF2Q12933 501 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 HLTFQ14527 1009 aaKnown RBP eCLIP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 SPECC1LQ69YQ0 1117 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 ALG1LQ6GMV1 187 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 RAET1GQ6H3X3 334 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 HEATR4Q86WZ0 1026 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 PGBD5Q8N414 524 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 KCTD6Q8NC69 237 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 MAML1Q92585 1016 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 NSMCE3Q96MG7 304 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 CMKLR1Q99788 373 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 CARS2Q9HA77 564 aaKnown RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 EPB41L5Q9HCM4 733 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 LRIT1Q9P2V4 623 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 ACSL6Q9UKU0 697 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 RPL26L1Q9UNX3 145 aaKnown RBP12.97□□□□□ -0.33
RPAIN-202ENST00000381208 UNC13CQ8NB66 2214 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 LRRK1Q38SD2 2015 aa12.97□□□□□ -0.33
RPAIN-202ENST00000381208 A0A1W2PNU3 283 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 A0A1W2PQM1 296 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 A8MX80 341 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 MATN3O15232 486 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 NOBOXO60393 691 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 PROSCO94903 275 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 IVLP07476 585 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 JMJD7P0C870 316 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 IL4RP24394 825 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 CCNCP24863 283 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 HNRNPH3P31942 346 aaKnown RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 ETV3P41162 512 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 EPHB1P54762 984 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 MAXP61244 160 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 CDK3Q00526 305 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 ITKQ08881 620 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 BIRC2Q13490 618 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 TRIM14Q14142 442 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 DPYSL3Q14195 570 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 TAF1BQ53T94 588 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 TXNRD3NBQ6F5E7 133 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 FOXR1Q6PIV2 292 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 ZNF765Q7L2R6 523 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 SPRED1Q7Z699 444 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 C17orf82Q86X59 251 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 NRSN1Q8IZ57 195 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 CPLX3Q8WVH0 158 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 SEMA3CQ99985 751 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 DPYSL5Q9BPU6 564 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 LGR4Q9BXB1 951 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 FRMD8Q9BZ67 464 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 B3GNT4Q9C0J1 378 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 CDH19Q9H159 772 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 MRPL40Q9NQ50 206 aaKnown RBP12.96□□□□□ -0.33
RPAIN-202ENST00000381208 CTTNBP2NLQ9P2B4 639 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 SLC17A4Q9Y2C5 497 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 PCDHGA4Q9Y5G9 962 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 SHROOM3Q8TF72 1996 aa12.96□□□□□ -0.33
RPAIN-202ENST00000381208 A0A0J9YYE9 177 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 TTC24A2A3L6 582 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 B4DGG1 531 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 FZD6O60353 706 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 TRBC1P01850 177 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 GYPCP04921 128 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 CEACAM5P06731 702 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 NUDT7P0C024 238 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 LHCGRP22888 699 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 MAN1A1P33908 653 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 UGT1A5P35504 534 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 GPR3P46089 330 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 GPR1P46091 355 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 ARSEP51690 589 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 ZFP36L1Q07352 338 aaKnown RBP12.95□□□□□ -0.34
RPAIN-202ENST00000381208 NR1D2Q14995 579 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 TCEA2Q15560 299 aa12.95□□□□□ -0.34
RPAIN-202ENST00000381208 SLC18A3Q16572 532 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms