RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ZNF564Q8TBZ8 553 aaPredicted RBP15.98■□□□□ 0.15
VCX3A-201ENST00000381089 SPOCK2Q92563 424 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 NKD1Q969G9 470 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 ZNF599Q96NL3 588 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 SLC12A9Q9BXP2 914 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 PARVAQ9NVD7 372 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 GPATCH2LQ9NWQ4 482 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 KCNK4Q9NYG8 393 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 TUBD1Q9UJT1 453 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 SUFUQ9UMX1 484 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 SIK3Q9Y2K2 1263 aa15.98■□□□□ 0.15
VCX3A-201ENST00000381089 ZNF891A8MT65 544 aaPredicted RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 PRPSAP2O60256 369 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 RNF8O76064 485 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 CPP00450 1065 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 GM2AP17900 193 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 ERCC2P18074 760 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 AK4P27144 223 aaPredicted RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 TEAD1P28347 426 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 CD1CP29017 333 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 MAN1A1P33908 653 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 POLE2P56282 527 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 GPLD1P80108 840 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 LBRQ14739 615 aaKnown RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 CNGA3Q16281 694 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 PPP6R3Q5H9R7 873 aaPredicted RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 COLEC12Q5KU26 742 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 DCAF12Q5T6F0 453 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 CDKAL1Q5VV42 579 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 RAET1GQ6H3X3 334 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 NRROSQ86YC3 692 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 MCOLN2Q8IZK6 566 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 CACNA2D3Q8IZS8 1091 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 NSMCE1Q8WV22 266 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 ART4Q93070 314 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 DTD2Q96FN9 168 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 AHCYL2Q96HN2 611 aaKnown RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 TEFMQ96QE5 360 aaKnown RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 FRMD8Q9BZ67 464 aaPredicted RBP15.97■□□□□ 0.15
VCX3A-201ENST00000381089 SLC39A1Q9NY26 324 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 PHTF1Q9UMS5 762 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 SDK2Q58EX2 2172 aa15.97■□□□□ 0.15
VCX3A-201ENST00000381089 PSMD11O00231 422 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.15
VCX3A-201ENST00000381089 IVLP07476 585 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 THRAP10827 490 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 LIFP15018 202 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 FERP16591 822 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 UGT1A3P35503 534 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 ACTR1BP42025 376 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 NOP2P46087 812 aaKnown RBP15.96■□□□□ 0.15
VCX3A-201ENST00000381089 ACTR1AP61163 376 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 CTBSQ01459 385 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 SQSTM1Q13501 440 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 FAM129CQ86XR2 697 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 PSTKQ8IV42 348 aaKnown RBP15.96■□□□□ 0.15
VCX3A-201ENST00000381089 ARHGAP12Q8IWW6 846 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 NRSN1Q8IZ57 195 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 PELI3Q8N2H9 469 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 KIAA1143Q96AT1 154 aaPredicted RBP15.96■□□□□ 0.15
VCX3A-201ENST00000381089 EFHD1Q9BUP0 239 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 SNRNP25Q9BV90 132 aaKnown RBP15.96■□□□□ 0.15
VCX3A-201ENST00000381089 ZWILCHQ9H900 591 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 PCSK1NQ9UHG2 260 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 SLC17A4Q9Y2C5 497 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 B3GALT1Q9Y5Z6 326 aa15.96■□□□□ 0.15
VCX3A-201ENST00000381089 COL12A1Q99715 3063 aa15.96■□□□□ 0.14
VCX3A-201ENST00000381089 IGHV1OR21-1A0A087WYE8 117 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 B4E171 279 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 HTRA2O43464 458 aaPredicted RBP15.95■□□□□ 0.14
VCX3A-201ENST00000381089 RAD1O60671 282 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 ADCY8P40145 1251 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 ETV3P41162 512 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 TSPAN7P41732 249 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 GPR1P46091 355 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 HCAR3P49019 387 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 COPB1P53618 953 aaKnown RBP15.95■□□□□ 0.14
VCX3A-201ENST00000381089 OGDHQ02218 1023 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 UBXN1Q04323 297 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 SRSF1Q07955 248 aaKnown RBP eCLIP15.95■□□□□ 0.14
VCX3A-201ENST00000381089 CA9Q16790 459 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 RALGPS1Q5JS13 557 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 NKAIN2Q5VXU1 208 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 TMEM71Q6P5X7 295 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 ARHGAP36Q6ZRI8 547 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 USP45Q70EL2 814 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 PTRH1Q86Y79 214 aaKnown RBP15.95■□□□□ 0.14
VCX3A-201ENST00000381089 NAGSQ8N159 534 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 OR10G6Q8NH81 332 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 NUDCD1Q96RS6 583 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 KCTD15Q96SI1 283 aaPredicted RBP15.95■□□□□ 0.14
VCX3A-201ENST00000381089 SLC38A3Q99624 504 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 PCDHGC4Q9Y5F7 938 aa15.95■□□□□ 0.14
VCX3A-201ENST00000381089 EFCAB7A8K855 629 aa15.94■□□□□ 0.14
VCX3A-201ENST00000381089 PPM1DO15297 605 aa15.94■□□□□ 0.14
VCX3A-201ENST00000381089 DUX1O43812 170 aa15.94■□□□□ 0.14
VCX3A-201ENST00000381089 NTRK1P04629 796 aa15.94■□□□□ 0.14
VCX3A-201ENST00000381089 PYGLP06737 847 aa15.94■□□□□ 0.14
VCX3A-201ENST00000381089 TNFAIP3P21580 790 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms