RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SGCBQ16585 318 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ARHGAP40Q5TG30 622 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 HECTD2Q5U5R9 776 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 TTC39BQ5VTQ0 682 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MFSD6LQ8IWD5 586 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 SPEM1Q8N4L4 309 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GBP7Q8N8V2 638 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 AVL9Q8NBF6 648 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 HCAR2Q8TDS4 363 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NAT6Q93015 286 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 C12orf66Q96MD2 445 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 TMEM121Q9BTD3 319 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NPHS2Q9NP85 383 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 LTB4R2Q9NPC1 389 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CRTAC1Q9NQ79 661 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ANLNQ9NQW6 1124 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GRHL1Q9NZI5 618 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MID2Q9UJV3 735 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 EDARQ9UNE0 448 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 KCNK6Q9Y257 313 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 R3HDM2Q9Y2K5 976 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PCDHA3Q9Y5H8 950 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DDX60Q8IY21 1712 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GSTA4O15217 222 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PRKCGP05129 697 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GSTT1P30711 240 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MAGEA4P43358 317 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GLRBP48167 497 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GTF2BQ00403 316 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 RGS1Q08116 209 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 VAC14Q08AM6 782 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ITGA9Q13797 1035 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 BLMHQ13867 455 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 EIF4HQ15056 248 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 UGP2Q16851 508 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CARD16Q5EG05 197 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 FAM182AQ5T1J6 154 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CERCAMQ5T4B2 595 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 FAM151BQ6UXP7 276 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CCDC81Q6ZN84 652 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 SDR16C5Q8N3Y7 309 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 SLC44A3Q8N4M1 653 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PNPLA1Q8N8W4 532 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DEPDC7Q96QD5 511 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MMADHCQ9H3L0 296 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 TRABDQ9H4I3 376 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 EPHX3Q9H6B9 360 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ZDHHC18Q9NUE0 388 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NKX1-2Q9UD57 310 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ZFP69BQ9UJL9 534 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ANGPTL2Q9UKU9 493 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CHKBQ9Y259 395 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 WASF2Q9Y6W5 498 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 DCLK1O15075 740 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CDH16O75309 829 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 TRAPPC6AO75865 159 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 TTC4O95801 387 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GZMAP12544 262 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 HLA-DPA1P20036 260 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MPSTP25325 297 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 VARSP26640 1264 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PTGIRP43119 386 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PTDSS1P48651 473 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 AFF3P51826 1226 aaKnown RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NEK2P51955 445 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 SLC9A5Q14940 896 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 C15orf59Q2T9L4 293 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-202ENST00000379446 TERB1Q8NA31 727 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 PLEKHO2Q8TD55 490 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 ITFG2Q969R8 447 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 GAL3ST4Q96RP7 486 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 KCTD5Q9NXV2 234 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NINJ2Q9NZG7 142 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 CDH22Q9UJ99 828 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 RARRES3Q9UL19 164 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 NEU2Q9Y3R4 380 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 BTAF1O14981 1849 aa6.55□□□□□ -1.36
NEDD9-202ENST00000379446 MYO18BQ8IUG5 2567 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SHANK3Q9BYB0 1731 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 C2orf78A6NCI8 922 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 MID1O15344 667 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SERPINI2O75830 405 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 LYPLA2O95372 231 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 NUDT17P0C025 328 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TROVE2P10155 538 aaKnown RBP eCLIP6.54□□□□□ -1.369e-6■□□□□ 8.9
NEDD9-202ENST00000379446 ETS1P14921 441 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CHRNB2P17787 502 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 GJA4P35212 333 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CCNFP41002 786 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 PREPP48147 710 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 POU4F1Q01851 419 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SPARCL1Q14515 664 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 TRIP4Q15650 581 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SNX30Q5VWJ9 437 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 SLC9B2Q86UD5 537 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 ZC3H3Q8IXZ2 948 aaKnown RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 RAVER1Q8IY67 606 aaKnown RBP6.54□□□□□ -1.36
NEDD9-202ENST00000379446 CFAP206Q8IYR0 622 aa6.54□□□□□ -1.36
NEDD9-202ENST00000379446 FAM71AQ8IYT1 594 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms