RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SPOCD1Q6ZMY3 1216 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF567Q8N184 647 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 CELF4Q9BZC1 486 aaKnown RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 GJB4Q9NTQ9 266 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 KIAA1522Q9P206 1035 aaPredicted RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 KAT7O95251 611 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 CMPK1P30085 196 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 RRP1BQ14684 758 aaKnown RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 DPEP1P16444 411 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PSMD8P48556 350 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PRKG2Q13237 762 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC47A1Q96FL8 570 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PDYNP01213 254 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 NR2F6P10588 404 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 GDI2P50395 445 aaKnown RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ASF1AQ9Y294 204 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 MOXD2PA6NHM9 499 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 FGBP02675 491 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 FAM153BP0C7A2 387 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 XPNPEP3Q9NQH7 507 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 NR2C1P13056 603 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 USP4Q13107 963 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ATP1A4Q13733 1029 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC9B1Q4ZJI4 515 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 VASH1Q7L8A9 365 aaPredicted RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 THAP5Q7Z6K1 395 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 SATL1Q86VE3 508 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ADCY4Q8NFM4 1077 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PCBD2Q9H0N5 130 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 EPB41L1Q9H4G0 881 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 SGPL1O95470 568 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 RFKQ969G6 155 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 POLMQ9NP87 494 aaPredicted RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ADAM28Q9UKQ2 775 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 IKZF2Q9UKS7 526 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 C9J4A7 227 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 KCNJ5P48544 419 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 GRSF1Q12849 480 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 CRY2Q49AN0 593 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF527Q8NB42 609 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF548Q8NEK5 533 aaPredicted RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 NKD1Q969G9 470 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 NXPE2Q96DL1 559 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ADAM7Q9H2U9 754 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 TBC1D14Q9P2M4 693 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 M0R129 80 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PLK1P53350 603 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 USP46P62068 366 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 EIPR1Q53HC9 387 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 LCN1P1Q5VSP4 162 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 DENND5AQ6IQ26 1287 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 ACTRT1Q8TDG2 376 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 C12orf4Q9NQ89 552 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 TSPAN16Q9UKR8 245 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 NRCAMQ92823 1304 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 DHFRP00374 187 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 SNRPB2P08579 225 aaKnown RBP11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PTPN5P54829 565 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 TMEM125Q96AQ2 219 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 GMFGO60234 142 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PLGLB1Q02325 96 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 MINDY2Q8NBR6 621 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 SNX33Q8WV41 574 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
PTCHD1-201ENST00000379361 MPP2Q14168 576 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 PGM2L1Q6PCE3 622 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 PLCZ1Q86YW0 608 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SEC14L3Q9UDX4 400 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 GRM6O15303 877 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 THRBP10828 461 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SRCP12931 536 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 CAP2P40123 477 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 TNK2Q07912 1038 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 C17orf64Q86WR6 236 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ZZZ3Q8IYH5 903 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ZSCAN4Q8NAM6 433 aaPredicted RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 OR52E6Q96RD3 313 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 WDR12Q9GZL7 423 aaKnown RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 ASB8Q9H765 288 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 PSME3P61289 254 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 IL18Q14116 193 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SHC4Q6S5L8 630 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 C11orf65Q8NCR3 313 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 DNAJC28Q9NX36 388 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SPEF2Q9C093 1822 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 EIF5AP63241 154 aaKnown RBP11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SPAG4Q9NPE6 437 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SAGE2PA6NJ88 616 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC7A1P30825 629 aa11.22□□□□□ -0.61
PTCHD1-201ENST00000379361 HSD17B2P37059 387 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms