RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 C1DQ13901 141 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 SPANXN2Q5MJ10 180 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 CFAP52Q8N1V2 620 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ATOH1Q92858 354 aaPredicted RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 PHF21BQ96EK2 531 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 EXOC2Q96KP1 924 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 APOBEC3GQ9HC16 384 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ARHGEF3Q9NR81 526 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 VIRMAQ69YN4 1812 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 MRASO14807 208 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 C1RP00736 705 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 FLT3P36888 993 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 PTPN9P43378 593 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 SLC25A3Q00325 362 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ABRQ12979 859 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ANO7Q6IWH7 933 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 FAM45BPQ6NSW5 357 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 HCAR2Q8TDS4 363 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 C7orf43Q8WVR3 580 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 JSRP1Q96MG2 331 aaPredicted RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 DPY30Q9C005 99 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 RMI1Q9H9A7 625 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TAF1P21675 1872 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TSPAN1O60635 241 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 DPYSL3Q14195 570 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 NR6A1Q15406 480 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ADGRG2Q8IZP9 1017 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 DEFB119Q8N690 84 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TSPAN14Q8NG11 270 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TMEM175Q9BSA9 504 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 C9orf16Q9BUW7 83 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 MCCC2Q9HCC0 563 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TRIM39Q9HCM9 518 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 KCND1Q9NSA2 647 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 H0Y858 1186 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 DHX15O43143 795 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TNFRSF21O75509 655 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 TIPRLO75663 272 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ANPEPP15144 967 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 CSF2RAP15509 400 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 PSMB4P28070 264 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 RBMS1P29558 406 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 HNRNPH3P31942 346 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 IGFALSP35858 605 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 CTSOP43234 321 aaPredicted RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 CCT3P49368 545 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 CLCNKBP51801 687 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 DGCR6Q14129 220 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 SF1Q15637 639 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 CCDC153Q494R4 210 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 SWT1Q5T5J6 900 aaKnown RBP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 RNF43Q68DV7 783 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 KATNAL2Q8IYT4 538 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 RNFT2Q96EX2 444 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 MYO19Q96H55 970 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 FAM237BA0A1B0GVD1 139 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 A0A1W2PQ67 120 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 HACD1B0YJ81 288 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 KLHL18O94889 574 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 VAPBO95292 243 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 DRD4P21917 467 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 NUP62P37198 522 aaPredicted RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MGAT5Q09328 741 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MINDY4Q4G0A6 757 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 BTBD1Q9H0C5 482 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 NRDE2Q9H7Z3 1164 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 SUSD2Q9UGT4 822 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 R3HDM2Q9Y2K5 976 aaKnown RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 NDUFAF1Q9Y375 327 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ASLP04424 464 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 TKTP29401 623 aaKnown RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 HPCAL1P37235 193 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 HK2P52789 917 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ZSWIM7Q19AV6 140 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 AP5B1Q2VPB7 878 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 INTS6LQ5JSJ4 861 aaKnown RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ZDHHC20Q5W0Z9 365 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 PRMT9Q6P2P2 845 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 RAVER1Q8IY67 606 aaKnown RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ZFP28Q8NHY6 868 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 SH3RF2Q8TEC5 729 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 TRPC4APQ8TEL6 797 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 DUSP16Q9BY84 665 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MINDY3Q9H8M7 445 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 CCDC167Q9P0B6 97 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 OPTCQ9UBM4 332 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ITGB1BP2Q9UKP3 347 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 BTN3A1O00481 513 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MDM4O15151 490 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 PIRTP0C851 137 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 PIK3R1P27986 724 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 TNFRSF8P28908 595 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF143P52747 638 aaPredicted RBP10.81□□□□□ -0.68
HIF3A-205ENST00000377670 IRF8Q02556 426 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MBTD1Q05BQ5 628 aa10.81□□□□□ -0.68
HIF3A-205ENST00000377670 MILR1Q7Z6M3 343 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms