RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TCAF2A6NFQ2 919 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 PTPN9P43378 593 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 IDH2P48735 452 aaKnown RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 MANFP55145 182 aaKnown RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 EXOC3L1Q86VI1 746 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 BRI3BPQ8WY22 251 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 RORBQ92753 470 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 HBS1LQ9Y450 684 aaKnown RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 GMFGO60234 142 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 ITPKBP27987 946 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 NOMO1Q15155 1222 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 KCTD19Q17RG1 926 aaPredicted RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 PLEKHA7Q6IQ23 1121 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 VITQ6UXI7 678 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 PIWIL4Q7Z3Z4 852 aaKnown RBP13.62□□□□□ -0.23
GPC6-201ENST00000377047 ITCHQ96J02 903 aa13.62□□□□□ -0.23
GPC6-201ENST00000377047 RHPN2P1A8MT19 583 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 AP3D1O14617 1153 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 SLC34A1Q06495 639 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 ANXA8L1Q5VT79 327 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 TAC4Q86UU9 113 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 PCDHB1Q9Y5F3 818 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 ATP6AP2A0A1C7CYW4 349 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 OR2AG2A6NM03 316 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 FSCN2O14926 492 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 ATP6AP2O75787 350 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 GRIA3P42263 894 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 CACNG1Q06432 222 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 TMC5Q6UXY8 1006 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 CMC1Q7Z7K0 106 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 FAM129CQ86XR2 697 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 CFAP206Q8IYR0 622 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 OFCC1Q8IZS5 231 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 ZNF248Q8NDW4 579 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 DPEP2Q9H4A9 486 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 POLMQ9NP87 494 aaPredicted RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 TCRBV9S1A1TA0A576 114 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 C5orf60A6NFR6 353 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 NDST3O95803 873 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 WARSP23381 471 aaKnown RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 SP2Q02086 613 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 KRR1Q13601 381 aaKnown RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 HECTD2Q5U5R9 776 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 TRIQKQ629K1 86 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 SLC4A11Q8NBS3 891 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 GRIP2Q9C0E4 1043 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 MMADHCQ9H3L0 296 aaPredicted RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 RFXANKO14593 260 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 PRMT5O14744 637 aaPredicted RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 CCL5P13501 91 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 AUHQ13825 339 aaKnown RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 ZNF563Q8TA94 476 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 CENPIQ92674 756 aaPredicted RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 OR52E6Q96RD3 313 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 LMAN2LQ9H0V9 348 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 EQTNQ9NQ60 294 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 SAR1AQ9NR31 198 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 OSER1Q9NX31 292 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 H3BNH8 94 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 COX4I1P13073 169 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 LMO2P25791 158 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 CDC42P60953 191 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 TLE2Q04725 743 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 TRIM25Q14258 630 aaKnown RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 DTNBP1Q96EV8 351 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 B3GALT6Q96L58 329 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 VPS35Q96QK1 796 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 FNDC11Q9BVV2 318 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 BRINP2Q9C0B6 783 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 C3orf14Q9HBI5 128 aa13.61□□□□□ -0.23
GPC6-201ENST00000377047 RCOR3Q9P2K3 495 aaPredicted RBP13.61□□□□□ -0.23
GPC6-201ENST00000377047 KCNU1A8MYU2 1149 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 NBNO60934 754 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ZNF57Q68EA5 555 aaPredicted RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 FAM171BQ6P995 826 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 DEF8Q6ZN54 512 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 CKAP2Q8WWK9 683 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 RPL10LQ96L21 214 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 ARHGEF4Q9NR80 690 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 CLDND1Q9NY35 253 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 MCM8Q9UJA3 840 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PRKAB1Q9Y478 270 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 A0A1W2PQ67 120 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 SLC31A1O15431 190 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 POP4O95707 220 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 CDH13P55290 713 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 NDUFA9Q16795 377 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 IZUMO1Q8IYV9 350 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 PYDC1Q8WXC3 89 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 NMD3Q96D46 503 aaKnown RBP13.6□□□□□ -0.23
GPC6-201ENST00000377047 HEPHQ9BQS7 1158 aa13.6□□□□□ -0.23
GPC6-201ENST00000377047 BCL2L14Q9BZR8 327 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms