RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 DHFR2Q86XF0 187 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 AQP12AQ8IXF9 295 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 NUP93Q8N1F7 819 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PSMG2Q969U7 264 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 SEMA6AQ9H2E6 1030 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TFB2MQ9H5Q4 396 aaKnown RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 HSFX1Q9UBD0 423 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 NDUFAF1Q9Y375 327 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 KCTD3Q9Y597 815 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 FXYD1O00168 92 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 NME4O00746 187 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 DLGAP1O14490 977 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 IGLV3-27P01718 113 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PRR35P0CG20 571 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ZNF37AP17032 561 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 CD52P31358 61 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TBX4P57082 545 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TUBA4AP68366 448 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 YWHAHQ04917 246 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 LAMB3Q13751 1172 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 SEMA3AQ14563 771 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 OR4D1Q15615 310 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 NRF1Q16656 503 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 INTS11Q5TA45 600 aaKnown RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PCYOX1LQ8NBM8 494 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TFAP2CQ92754 450 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 UPF1Q92900 1129 aaKnown RBP eCLIP10.67□□□□□ -0.72e-6■■■■■ 28.9
ABCF1-202ENST00000376545 FUBP3Q96I24 572 aaKnown RBP eCLIP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 FEM1CQ96JP0 617 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TUBB1Q9H4B7 451 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 SDR39U1Q9NRG7 319 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 RGS18Q9NS28 235 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ATXN10Q9UBB4 475 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 UXTQ9UBK9 157 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 MRPL42Q9Y6G3 142 aaKnown RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 A0A0J9YYE9 177 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 A0A1B0GTW7 788 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 OR51F1A6NGY5 319 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 CDH2P19022 906 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 OGNP20774 298 aaKnown RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ATP6V1B2P21281 511 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 PBX3P40426 434 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 SLC7A2P52569 658 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 PRKCQQ04759 706 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 FOXM1Q08050 763 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 SERINC3Q13530 473 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 SETMARQ53H47 684 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 LCN8Q6JVE9 175 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 C17orf99Q6UX52 265 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 AMIGO2Q86SJ2 522 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ADAMTS16Q8TE57 1224 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TSPEARQ8WU66 669 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 IGSF8Q969P0 613 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 LRCH3Q96II8 777 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TBATAQ96M53 351 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 EFHD1Q9BUP0 239 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 C1QTNF3Q9BXJ4 246 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 PDFQ9HBH1 243 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TMEM165Q9HC07 324 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ARHGAP10A1A4S6 786 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TMEM189-UBE2V1I3L0A0 370 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 CD3EAPO15446 510 aaKnown RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 CSPG5O95196 566 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 GOT2P00505 430 aaKnown RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ATP6V1B1P15313 513 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 HLA-DPA1P20036 260 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 RANBP1P43487 201 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ZFP36L2P47974 494 aaKnown RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 PRAMEP78395 509 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 LPIN1Q14693 890 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 PARP15Q460N3 678 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ACBD5Q5T8D3 534 aaPredicted RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ARHGAP22Q7Z5H3 698 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TFAP2DQ7Z6R9 452 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 SLC15A3Q8IY34 581 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TSPAN14Q8NG11 270 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 OR6P1Q8NGX9 317 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 HM13Q8TCT9 377 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 CANT1Q8WVQ1 401 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 BTN2A3PQ96KV6 586 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 FAM210AQ96ND0 272 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TRIB3Q96RU7 358 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 FBXO44Q9H4M3 255 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 NOL11Q9H8H0 719 aaKnown RBP10.66□□□□□ -0.7
ABCF1-202ENST00000376545 PNPLA3Q9NST1 481 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 TMCO1Q9UM00 188 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 SNX13Q9Y5W8 968 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 SQORQ9Y6N5 450 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 VWA8A3KMH1 1905 aa10.66□□□□□ -0.7
ABCF1-202ENST00000376545 ATP6AP2A0A1C7CYW4 349 aa10.65□□□□□ -0.7
ABCF1-202ENST00000376545 TTC24A2A3L6 582 aaPredicted RBP10.65□□□□□ -0.7
ABCF1-202ENST00000376545 H3BMM5 538 aa10.65□□□□□ -0.7
ABCF1-202ENST00000376545 PPP6CO00743 305 aa10.65□□□□□ -0.7
ABCF1-202ENST00000376545 AZIN1O14977 448 aa10.65□□□□□ -0.7
ABCF1-202ENST00000376545 ATP6AP2O75787 350 aa10.65□□□□□ -0.7
ABCF1-202ENST00000376545 RPP40O75818 363 aaKnown RBP10.65□□□□□ -0.7
ABCF1-202ENST00000376545 FGF1P05230 155 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms