RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 FAM83EQ2M2I3 478 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 USP41Q3LFD5 358 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 LSM12Q3MHD2 195 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 IL31Q6EBC2 164 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 DEFB128Q7Z7B8 93 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 DENND1CQ8IV53 801 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 PIP4K2CQ8TBX8 421 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 FEM1CQ96JP0 617 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 MRPL1Q9BYD6 325 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 SEZ6LQ9BYH1 1024 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 MTRRQ9UBK8 725 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 SH3GLB1Q9Y371 365 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 ARL5AQ9Y689 179 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 CCNT2O60583 730 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 SEC24AO95486 1093 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 PIRTP0C851 137 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 COX4I1P13073 169 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 CD1EP15812 388 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 ATP5F1P24539 256 aaPredicted RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 HOXD9P28356 352 aaPredicted RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 ALDH1A3P47895 512 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 SLC11A2P49281 568 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 KPNA2P52292 529 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 HK2P52789 917 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 TECRLQ5HYJ1 363 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 PGM2L1Q6PCE3 622 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.99□□□□□ -0.178e-8■□□□□ 10.5
MSH5-202ENST00000375740 FRMD7Q6ZUT3 714 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 PDCD6IPQ8WUM4 868 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 ZNF296Q8WUU4 475 aaPredicted RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 ANKRD49Q8WVL7 239 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 SLC35B4Q969S0 331 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 TSPAN17Q96FV3 270 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 DCUN1D1Q96GG9 259 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 CDK5RAP1Q96SZ6 601 aaKnown RBP13.99□□□□□ -0.17
MSH5-202ENST00000375740 SLX1AQ9BQ83 275 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 VN1R3Q9BXE9 311 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 MAGEH1Q9H213 219 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 GKN1Q9NS71 199 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.99□□□□□ -0.17
MSH5-202ENST00000375740 DTNAQ9Y4J8 743 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 AK5Q9Y6K8 562 aa13.99□□□□□ -0.17
MSH5-202ENST00000375740 H3BNC9 293 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 COCHO43405 550 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 NPHS1O60500 1241 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 TRMUO75648 421 aaKnown RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 KLKB1P03952 638 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 LTA4HP09960 611 aaKnown RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 STT3AP46977 705 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 CDKN2DP55273 166 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 AGAP9Q5VTM2 703 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 MARVELD2Q8N4S9 558 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 TMIGD2Q96BF3 282 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 ZNF599Q96NL3 588 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 VTI1BQ9UEU0 232 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 CRYL1Q9Y2S2 319 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 FKTNO75072 461 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 CRTAMO95727 393 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 EFEMP2O95967 443 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 EPOP01588 193 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 FGF1P05230 155 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 JUNP05412 331 aaKnown RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 SERPINF2P08697 491 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 HLA-DPA1P20036 260 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 KCNA5P22460 613 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 PRDX6P30041 224 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 SERPINB5P36952 375 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 CDH4P55283 916 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 DNAJB13P59910 316 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 SLC14A2Q15849 920 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 HECTD3Q5T447 861 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 TMEM207Q6UWW9 146 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 GALNT7Q86SF2 657 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 DEFB107AQ8IZN7 70 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 SH3RF2Q8TEC5 729 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 UBXN10Q96LJ8 280 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 NSMCE3Q96MG7 304 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 LENG8Q96PV6 779 aaPredicted RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 CYP4F12Q9HCS2 524 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 NCKIPSDQ9NZQ3 722 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 SLCO1B7G3V0H7 640 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 GOT2P00505 430 aaKnown RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 HMGA1P17096 107 aaKnown RBP13.98□□□□□ -0.17
MSH5-202ENST00000375740 PFKPQ01813 784 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 ACVR1Q04771 509 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 KIAA1841Q6NSI8 718 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 AMIGO2Q86SJ2 522 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 KDM1BQ8NB78 822 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 OR13C4Q8NGS5 318 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 BRSK1Q8TDC3 778 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 CLSTN3Q9BQT9 956 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 HIPK3Q9H422 1215 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 DMTF1Q9Y222 760 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 SSX2IPQ9Y2D8 614 aa13.98□□□□□ -0.17
MSH5-202ENST00000375740 BACE2Q9Y5Z0 518 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms