RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 GNPTGQ9UJJ9 305 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 SERPINB7O75635 380 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 KCNE1P15382 129 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 YBX1P67809 324 aaKnown RBP21.15■□□□□ 0.98
UPF3A-202ENST00000375299 FOXM1Q08050 763 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 NFATC3Q12968 1075 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 CYP51A1Q16850 503 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 USP51Q70EK9 711 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 FAM35AQ86V20 835 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 ARHGAP12Q8IWW6 846 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 PNPT1Q8TCS8 783 aaKnown RBP21.15■□□□□ 0.98
UPF3A-202ENST00000375299 ACDQ96AP0 544 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 SMOQ99835 787 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 FAM49AQ9H0Q0 323 aaPredicted RBP21.15■□□□□ 0.98
UPF3A-202ENST00000375299 GIMAP2Q9UG22 337 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 DOLKQ9UPQ8 538 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 DNAJC15Q9Y5T4 150 aa21.15■□□□□ 0.98
UPF3A-202ENST00000375299 CPNE6O95741 557 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 BCAP31P51572 246 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 SPATS1Q496A3 300 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 WSCD1Q658N2 575 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 GRAMD4Q6IC98 578 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 MRGPRX2Q96LB1 330 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 PPP1R2P1Q96PQ5 205 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 OSMRQ99650 979 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 MUC13Q9H3R2 512 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 PCDHA9Q9Y5H5 950 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 TCRBV5S2A0A599 114 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 IQCA1LA6NCM1 817 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 SOBPA7XYQ1 873 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 K7EPI3 171 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 INPP4BO15327 924 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 MATN4O95460 622 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 FUCA1P04066 466 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 HLA-DQB2P05538 268 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 CHRM3P20309 590 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 KCNC1P48547 511 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 BMXP51813 675 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 NFKB2Q00653 900 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 RAB41Q5JT25 222 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 CCNYL2Q5T2Q4 361 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 RANBP10Q6VN20 620 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 KDELC2Q7Z4H8 507 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 ZMIZ2Q8NF64 920 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 MAGEE2Q8TD90 523 aaPredicted RBP21.14■□□□□ 0.97
UPF3A-202ENST00000375299 CHPT1Q8WUD6 406 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 CRTAC1Q9NQ79 661 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 SELENONQ9NZV5 590 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 WDR37Q9Y2I8 494 aa21.14■□□□□ 0.97
UPF3A-202ENST00000375299 DICER1Q9UPY3 1922 aaKnown RBP21.14■□□□□ 0.97
UPF3A-202ENST00000375299 C9JVG2 144 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 MATN3O15232 486 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 BAIAP3O94812 1187 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 MTHFD1P11586 935 aaKnown RBP21.13■□□□□ 0.97
UPF3A-202ENST00000375299 CCNA2P20248 432 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 YAP1P46937 504 aaKnown RBP21.13■□□□□ 0.97
UPF3A-202ENST00000375299 CDH13P55290 713 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 GRB7Q14451 532 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 XKR4Q5GH76 650 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 PHYKPLQ8IUZ5 450 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 OR13F1Q8NGS4 319 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 GABPB2Q8TAK5 448 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-202ENST00000375299 CCDC68Q9H2F9 335 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 SOX17Q9H6I2 414 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-202ENST00000375299 INTS10Q9NVR2 710 aaKnown RBP21.13■□□□□ 0.97
UPF3A-202ENST00000375299 IFT80Q9P2H3 777 aaPredicted RBP21.13■□□□□ 0.97
UPF3A-202ENST00000375299 NEU3Q9UQ49 428 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 PTGDR2Q9Y5Y4 395 aa21.13■□□□□ 0.97
UPF3A-202ENST00000375299 PIP5K1BO14986 540 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 MAFKO60675 156 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 GPR32O75388 356 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 WISP3O95389 354 aaPredicted RBP21.12■□□□□ 0.97
UPF3A-202ENST00000375299 ZNF182P17025 639 aaPredicted RBP21.12■□□□□ 0.97
UPF3A-202ENST00000375299 MAP4P27816 1152 aaKnown RBP21.12■□□□□ 0.97
UPF3A-202ENST00000375299 HERVK_113P63132 956 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 SH3BP2P78314 561 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 ADARB1P78563 741 aaKnown RBP21.12■□□□□ 0.97
UPF3A-202ENST00000375299 TRAF2Q12933 501 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 COQ5Q5HYK3 327 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 GPR158Q5T848 1215 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 TMEM207Q6UWW9 146 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 CHST15Q7LFX5 561 aaPredicted RBP21.12■□□□□ 0.97
UPF3A-202ENST00000375299 BHLHA9Q7RTU4 235 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 ISCA2Q86U28 154 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 TAC4Q86UU9 113 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 TWIST2Q8WVJ9 160 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 TMEM125Q96AQ2 219 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 ERVK-6Q9BXR3 956 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 RNF39Q9H2S5 420 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 DSEQ9UL01 958 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 VWA7Q9Y334 891 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 MIA3Q5JRA6 1907 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 GABRDO14764 452 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 SNAP29O95721 258 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 ADCYAP1R1P41586 468 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 GSK3BP49841 420 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 TMBIM6P55061 237 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 ATP1A4Q13733 1029 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 NOMO2Q5JPE7 1267 aa21.12■□□□□ 0.97
UPF3A-202ENST00000375299 NCCRP1Q6ZVX7 275 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms