RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 YIPF2Q9BWQ6 316 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 KCTD5Q9NXV2 234 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NT5C1B-RDH14C9J2C7 533 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ATP6AP2O75787 350 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ACO1P21399 889 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 ADRA1DP25100 572 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 DPYSL3Q14195 570 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 OR6B3Q8NGW1 331 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 KAT5Q92993 513 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SRRDQ9UH36 339 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SLC7A8Q9UHI5 535 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 STUB1Q9UNE7 303 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 CMAHPQ9Y471 501 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ULK1O75385 1050 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 BMP7P18075 431 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 FBXW4P57775 412 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 FAM102AQ5T9C2 384 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 SLC4A11Q8NBS3 891 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 C3orf58Q8NDZ4 430 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NPLOC4Q8TAT6 608 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 IFT46Q9NQC8 304 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 DNAJB9Q9UBS3 223 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ACOX3O15254 700 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 CYP11A1P05108 521 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 GRIA4P48058 902 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PRELPP51888 382 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ARFIP1P53367 373 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 Q3ZCU0 254 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 XRRA1Q6P2D8 792 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ZNF512BQ96KM6 892 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 CNPPD1Q9BV87 410 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 TBC1D24Q9ULP9 559 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PCDHA11Q9Y5I1 949 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 DGKBQ9Y6T7 804 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 GTF2F2P13984 249 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ERVK-8P63133 956 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ADGRD1Q6QNK2 874 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 HPS6Q86YV9 775 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SEMA6DQ8NFY4 1073 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 TROQ12816 1431 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 HTR7P34969 479 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 MILR1Q7Z6M3 343 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 DMRTB1Q96MA1 342 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NFKBIZQ9BYH8 718 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NUDT19A8MXV4 375 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 INMT-MINDY4F8WBC2 141 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SLC19A2O60779 497 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NPM3O75607 178 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 IFNA2P01563 188 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 IFNGP01579 166 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 WDR53Q7Z5U6 358 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 LINC00471Q8N535 108 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 GLB1L3Q8NCI6 653 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 THRSPQ92748 146 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 FAM135AQ9P2D6 1515 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SHBGP04278 402 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ERBB2P04626 1255 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NFICP08651 508 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MAPK3P27361 379 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 AQP4P55087 323 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CTSWP56202 376 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 CDO1Q16878 200 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MTSS1LQ765P7 747 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SCUBE3Q8IX30 993 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NXPE2Q96DL1 559 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 PRKAG2Q9UGJ0 569 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 H3BNH8 94 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SRCP12931 536 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF33BQ06732 778 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SNTA1Q13424 505 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 VEPH1Q14D04 833 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 BAK1Q16611 211 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SLC2A7Q6PXP3 512 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 LRRN1Q6UXK5 716 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ABI1Q8IZP0 508 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TM9SF4Q92544 642 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 COQ10AQ96MF6 247 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SGCEO43556 437 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 DNAJB6O75190 326 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 BCAS2O75934 225 aaPredicted RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 MAP3K6O95382 1288 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ZNF81P51508 661 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 UBAP2LQ14157 1087 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 GIT2Q14161 759 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 DCAF4Q8WV16 495 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 BSNDQ8WZ55 320 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SLC9A7Q96T83 725 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TMEM45AQ9NWC5 275 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 MMP12P39900 470 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 RPL35P42766 123 aaKnown RBP6.61□□□□□ -1.35
UBR4-204ENST00000375254 CTSKP43235 329 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 NRG3P56975 720 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 FAM46DQ8NEK8 389 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 SPATA9Q9BWV2 254 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ADGRE2Q9UHX3 823 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 ERBB3P21860 1342 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TMEM221A6NGB7 291 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TRAPPC2P0DI81 140 aa6.61□□□□□ -1.35
UBR4-204ENST00000375254 TRAPPC2BP0DI82 140 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms