RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PKP3Q9Y446 797 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 TRAFD1O14545 582 aaPredicted RBP24.96■■□□□ 1.59
CTSA-203ENST00000372459 HTRA2O43464 458 aaPredicted RBP24.96■■□□□ 1.59
CTSA-203ENST00000372459 SOCS5O75159 536 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 NDUFS3O75489 264 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 SUOXP51687 545 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 PDE12Q6L8Q7 609 aaKnown RBP24.96■■□□□ 1.59
CTSA-203ENST00000372459 TMEM207Q6UWW9 146 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 TTC7BQ86TV6 843 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 PIM3Q86V86 326 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 CCDC126Q96EE4 140 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 PRR11Q96HE9 360 aaPredicted RBP24.96■■□□□ 1.59
CTSA-203ENST00000372459 ATP13A3Q9H7F0 1226 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 LNPEPQ9UIQ6 1025 aa24.96■■□□□ 1.59
CTSA-203ENST00000372459 UBA6A0AVT1 1052 aaPredicted RBP24.95■■□□□ 1.58
CTSA-203ENST00000372459 NEDD8-MDP1E9PL57 170 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 PIGNO95427 931 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 SERPINA6P08185 405 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 KRT16P08779 473 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 DNAJB13P59910 316 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 NTHL1P78549 312 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 ZNF77Q15935 545 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 GRASPQ7Z6J2 395 aaPredicted RBP24.95■■□□□ 1.58
CTSA-203ENST00000372459 ZNF557Q8N988 423 aaPredicted RBP24.95■■□□□ 1.58
CTSA-203ENST00000372459 OR2AP1Q8NGE2 309 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 LPGAT1Q92604 370 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 IRF7Q92985 503 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 TMEM237Q96Q45 408 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 BBS2Q9BXC9 721 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 GPR63Q9BZJ6 419 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 CCDC68Q9H2F9 335 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 TNKS2Q9H2K2 1166 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 BPIFA1Q9NP55 256 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 APOBEC2Q9Y235 224 aaKnown RBP24.95■■□□□ 1.58
CTSA-203ENST00000372459 RAP2CQ9Y3L5 183 aa24.95■■□□□ 1.58
CTSA-203ENST00000372459 ZNF197O14709 1029 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 ZNF821O75541 412 aaPredicted RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 PRAMEF12O95522 483 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 SRCP12931 536 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 SNRPD1P62314 119 aaKnown RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 PFKPQ01813 784 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 PTPRRQ15256 657 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 DGKKQ5KSL6 1271 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 PAF1Q8N7H5 531 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 SGF29Q96ES7 293 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 NSL1Q96IY1 281 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 RPL10LQ96L21 214 aaKnown RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 ARL8BQ9NVJ2 186 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 IL17CQ9P0M4 197 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 HS3ST2Q9Y278 367 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 ZNF195O14628 629 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 PER2O15055 1255 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 CTPS1P17812 591 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 HMGCLP35914 325 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 CTSOP43234 321 aaPredicted RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 TTPAP49638 278 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 HK2P52789 917 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 PDAP1Q13442 181 aaKnown RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 FUT11Q495W5 492 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 CFAP157Q5JU67 520 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 ZNF697Q5TEC3 545 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 MAVSQ7Z434 540 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 RYBPQ8N488 228 aaPredicted RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 ISG20Q96AZ6 181 aaKnown RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 SLC7A6OSQ96CW6 309 aaPredicted RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 RAB3IPQ96QF0 476 aaPredicted RBP24.94■■□□□ 1.58
CTSA-203ENST00000372459 SPHK2Q9NRA0 654 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 NCKIPSDQ9NZQ3 722 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 SLC25A13Q9UJS0 675 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 NOTCH4Q99466 2003 aa24.94■■□□□ 1.58
CTSA-203ENST00000372459 POU2F2P09086 479 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 IDH3AP50213 366 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 TIAL1Q01085 375 aaKnown RBP eCLIP24.93■■□□□ 1.58
CTSA-203ENST00000372459 USP4Q13107 963 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 PEX6Q13608 980 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 ZRANB3Q5FWF4 1079 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 ARL13AQ5H913 290 aaPredicted RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 AARS2Q5JTZ9 985 aaKnown RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 ELMSAN1Q6PJG2 1045 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 TXNDC5Q8NBS9 432 aaKnown RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 PTCD3Q96EY7 689 aaKnown RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 POMKQ9H5K3 350 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 ARMCX1Q9P291 453 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 SORCS3Q9UPU3 1222 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 NPHS1O60500 1241 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 SRP72O76094 671 aaKnown RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 SNUPNO95149 360 aaKnown RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 CA3P07451 260 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 CHRNGP07510 517 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 ALPIP09923 528 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 TCF3P15923 654 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 TFEBP19484 476 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 CALB2P22676 271 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 PTPN4P29074 926 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 SERPINA4P29622 427 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 FMO4P31512 558 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 SERPINB5P36952 375 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 STK19P49842 368 aaPredicted RBP24.93■■□□□ 1.58
CTSA-203ENST00000372459 PRKAA1Q13131 559 aa24.93■■□□□ 1.58
CTSA-203ENST00000372459 TUBB3Q13509 450 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms