RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 MYL12AP19105 171 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 IL1R2P27930 398 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 FOXN2P32314 431 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 CAPZA2P47755 286 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 NDUFV1P49821 464 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 IL10RBQ08334 325 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 CDCA2Q69YH5 1023 aaPredicted RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ESRP1Q6NXG1 681 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 R3HCC1LQ7Z5L2 792 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ZFP28Q8NHY6 868 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 OR52E6Q96RD3 313 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 HAPLN3Q96S86 360 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 BCO2Q9BYV7 579 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 ZNHIT2Q9UHR6 403 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 MRPS23Q9Y3D9 190 aaKnown RBP11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 RAI2Q9Y5P3 530 aa11.85□□□□□ -0.51
DEPDC1-201ENST00000370966 NT5C1B-RDH14C9J2C7 533 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 NFKBIEO00221 500 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 RFXANKO14593 260 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 SEPT4O43236 478 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 AHCYL1O43865 530 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 METTL18O95568 372 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 EOMESO95936 686 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 NTSP30990 170 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CRATP43155 626 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 GPR1P46091 355 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 BLVRAP53004 296 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 INAQ16352 499 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CA9Q16790 459 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 SPANXN2Q5MJ10 180 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 FAM151BQ6UXP7 276 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 HPS6Q86YV9 775 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 FIBCD1Q8N539 461 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 LEMD2Q8NC56 503 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 PLEKHO2Q8TD55 490 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 LENG8Q96PV6 779 aaPredicted RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 PANX1Q96RD7 426 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 RERGLQ9H628 205 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 KCTD5Q9NXV2 234 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 STMN3Q9NZ72 180 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 PRKAG3Q9UGI9 489 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 NCKAP1Q9Y2A7 1128 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 FZD9O00144 591 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 KRT75O95678 551 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 GNPDA1P46926 289 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 DSC2Q02487 901 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 GPR158Q5T848 1215 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 BHLHB9Q6PI77 547 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 TMEM199Q8N511 208 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CXorf40AQ8TE69 158 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 LRRC15Q8TF66 581 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 BORCS6Q96GS4 357 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 FAIM2Q9BWQ8 316 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CLK4Q9HAZ1 481 aaKnown RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 ARHGEF3Q9NR81 526 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CNTN6Q9UQ52 1028 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 NPHS1O60500 1241 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 GABRR2P28476 465 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CDH4P55283 916 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 JAG1P78504 1218 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 MPP1Q00013 466 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 PRKCQQ04759 706 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 LCP2Q13094 533 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 DEFB115Q30KQ5 88 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 XKR6Q5GH73 641 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 ARHGAP36Q6ZRI8 547 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 LUZP2Q86TE4 346 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 DPP10Q8N608 796 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 OR2T12Q8NG77 320 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 FCRL5Q96RD9 977 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 C2orf71A6NGG8 1288 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CST1P01037 141 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CORO1AP31146 461 aaKnown RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 MAPK9P45984 424 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 IDH2P48735 452 aaKnown RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 HCAR3P49019 387 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 ITGA1P56199 1179 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 SMIM11AP58511 58 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CDC42P60953 191 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 SP2Q02086 613 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 GNA13Q14344 377 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 DLG2Q15700 870 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 MPPE1Q53F39 396 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 ARMC4Q5T2S8 1044 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CNSTQ6PJW8 725 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 DOK6Q6PKX4 331 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 CYP20A1Q6UW02 462 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 FSTL5Q8N475 847 aaPredicted RBP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 ASZ1Q8WWH4 475 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 UPF1Q92900 1129 aaKnown RBP eCLIP11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 GMLQ99445 158 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 SPATA5L1Q9BVQ7 753 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 UNC93B1Q9H1C4 597 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms