RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CLEC18BQ6UXF7 455 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 C3orf62Q6ZUJ4 267 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 USP53Q70EK8 1073 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 TBC1D1Q86TI0 1168 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CPNE8Q86YQ8 564 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PSTKQ8IV42 348 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ZBED8Q8IZ13 594 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 FITM2Q8N6M3 262 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ANKRD42Q8N9B4 389 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 KCTD6Q8NC69 237 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CLEC18CQ8NCF0 446 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 NUP43Q8NFH3 380 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 OR5B17Q8NGF7 314 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PRPF31Q8WWY3 499 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ATG4AQ8WYN0 398 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 TMEM143Q96AN5 459 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CHFRQ96EP1 664 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 C9orf72Q96LT7 481 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 MCEEQ96PE7 176 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ZFYVE21Q9BQ24 234 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 FERMT1Q9BQL6 677 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CNPY3Q9BT09 278 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 HERC2P3Q9BVR0 1158 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 XYLT2Q9H1B5 865 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 STN1Q9H668 368 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 SYNCQ9H7C4 482 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 SP110Q9HB58 689 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 BAIAP2L1Q9UHR4 511 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 EVLQ9UI08 416 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ITGA11Q9UKX5 1188 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 TMA7Q9Y2S6 64 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 C2CD2Q9Y426 696 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 TEX51A0A1B0GUA7 166 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 C7orf72A4D263 438 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 FAM149AA5PLN7 773 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 F8VP50 259 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 M0QZ92 97 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 NRP1O14786 923 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 MDM4O15151 490 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ADAM12O43184 909 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 PSPNO60542 156 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CST8O60676 142 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CBFA2T3O75081 653 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 LRCH4O75427 683 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 GJB3O75712 270 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 TRUB2O95900 331 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 MT-ND3P03897 115 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 VTNP04004 478 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 PRKCAP17252 672 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 NAT1P18440 290 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CR2P20023 1033 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 GCAP28676 217 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 GDI1P31150 447 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CRYBB1P53674 252 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 PSMC1P62191 440 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 RPL7AP62424 266 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 RPL11P62913 178 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 RBP5P82980 135 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CYP4F8P98187 520 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 OTUD4Q01804 1114 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ROR1Q01973 937 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 DSG1Q02413 1049 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 INCA1Q0VD86 236 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 DPYSL3Q14195 570 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 NOMO1Q15155 1222 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 TRIP13Q15645 432 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 TRIP6Q15654 476 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 PRSS53Q2L4Q9 553 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 KRTAP21-3Q3LHN1 58 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 FAM133BQ5BKY9 247 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 FAM209AQ5JX71 171 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ATG16L1Q676U5 607 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 SPOPLQ6IQ16 392 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 LCLAT1Q6UWP7 414 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 MAMDC2Q7Z304 686 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 GPR155Q7Z3F1 870 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 UNC93AQ86WB7 457 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CEP57Q86XR8 500 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 SYNPOQ8N3V7 929 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 WDTC1Q8N5D0 677 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ENDOVQ8N8Q3 282 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 BANPQ8N9N5 519 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 UHMK1Q8TAS1 419 aaKnown RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ACTL9Q8TC94 416 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CPT1BQ92523 772 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ZNF75CPQ92670 426 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 TCEAL4Q96EI5 215 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 C1orf159Q96HA4 380 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 TMEM176AQ96HP8 235 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ZNF668Q96K58 619 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 ZBTB45Q96K62 511 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 SH2D3AQ9BRG2 576 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 HERPUD2Q9BSE4 406 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 NAT9Q9BTE0 207 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 HAPLN2Q9GZV7 340 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 KLC2Q9H0B6 622 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 SLC6A17Q9H1V8 727 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 CXorf56Q9H5V9 222 aa6.57□□□□□ -1.36
ECHDC1-202ENST00000368289 DCLRE1BQ9H816 532 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms