RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ASNA1O43681 348 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 RHOCP08134 193 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 S100A3P33764 101 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 MS4A2Q01362 244 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 IKBKEQ14164 716 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 MFSD10Q14728 455 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 DDR2Q16832 855 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 RNF219Q5W0B1 726 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-201ENST00000361866 FAM117BQ6P1L5 589 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 GPRIN3Q6ZVF9 776 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ADHFE1Q8IWW8 467 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 CFAP52Q8N1V2 620 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ABHD16BQ9H3Z7 469 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ABCC13Q9NSE7 274 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 C5orf58C9J3I9 102 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 NOBOXO60393 691 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 EDN1P05305 212 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 MTHFRP42898 656 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 SLC11A2P49281 568 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 MTPNP58546 118 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 RHDQ02161 417 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TRAF3Q13114 568 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 CDH18Q13634 790 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 GK3PQ14409 553 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 ZC3H12BQ5HYM0 836 aaKnown RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TIFABQ6ZNK6 161 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TLK2Q86UE8 772 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 PHC3Q8NDX5 983 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TMIGD2Q96BF3 282 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 C12orf43Q96C57 262 aaKnown RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 PCED1BQ96HM7 432 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TRMOQ9BU70 441 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 RNF39Q9H2S5 420 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 RMND5AQ9H871 391 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 AGO3Q9H9G7 860 aaKnown RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 MOCS1Q9NZB8 636 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 MARCH2Q9P0N8 246 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 ADGRE2Q9UHX3 823 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 GNG14A0A1W2PPG7 69 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 C9IYK1 514 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 BCAS2O75934 225 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 MZF1P28698 734 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 CPT1AP50416 773 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 GJA9P57773 515 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 RHOAP61586 193 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 C16orf59Q7L2K0 433 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 PAGE2Q7Z2X7 111 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 ERI1Q8IV48 349 aaKnown RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 CARNMT1Q8N4J0 409 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TTC30BQ8N4P2 665 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 OR2T12Q8NG77 320 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 PARK7Q99497 189 aaKnown RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 GPATCH1Q9BRR8 931 aaKnown RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 CDH9Q9ULB4 789 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 POLR3HQ9Y535 204 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TRIM17Q9Y577 477 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 GPR182O15218 404 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 SMIM10L2AP0DMW4 78 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 SMIM10L2BP0DMW5 78 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 PSMD5Q16401 504 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 IPPQ9Y573 584 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 GMPPBQ9Y5P6 360 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 IRS2Q9Y4H2 1338 aa13.89□□□□□ -0.19
COL6A1-201ENST00000361866 G3V2T6 193 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 PDHXO00330 501 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SNNO75324 88 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 ANXA6P08133 673 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SFSWAPQ12872 951 aaKnown RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 PPIL2Q13356 520 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 AARS2Q5JTZ9 985 aaKnown RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 CCDC80Q76M96 950 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 PIM3Q86V86 326 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 GPC2Q8N158 579 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SH3KBP1Q96B97 665 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 ZHX1-C8orf76Q96EF9 292 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 PCYT2Q99447 389 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 GPBP1L1Q9HC44 474 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 A8MT66 165 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 CAPN14A8MX76 684 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 BOLA2-SMG1P6H3BVE0 249 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 RAD51BO15315 384 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 CNOT3O75175 753 aaKnown RBP13.88□□□□□ -0.19
COL6A1-201ENST00000361866 C22orf31O95567 290 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 CDK18Q07002 472 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 MADCAM1Q13477 382 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SNX17Q15036 470 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 AP5B1Q2VPB7 878 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 TTLL9Q3SXZ7 439 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 ATG14Q6ZNE5 492 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 PLEKHH3Q7Z736 793 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 OR4L1Q8NH43 312 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 SHKBP1Q8TBC3 707 aa13.88□□□□□ -0.19
COL6A1-201ENST00000361866 TM6SF2Q9BZW4 377 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms