RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 FSTL5Q8N475 847 aaPredicted RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 OR9I1Q8NGQ6 314 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 DDI1Q8WTU0 396 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 LPGAT1Q92604 370 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 ISL2Q96A47 359 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 RPL10LQ96L21 214 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 RPRD1AQ96P16 312 aaPredicted RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 SACM1LQ9NTJ5 587 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 TBC1D13Q9NVG8 400 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 DUS2Q9NX74 493 aaKnown RBP9.12□□□□□ -0.95
TOP1-201ENST00000361337 VANGL2Q9ULK5 521 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 SPTBN2O15020 2390 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 COL1A2P08123 1366 aa9.12□□□□□ -0.95
TOP1-201ENST00000361337 FAM149AA5PLN7 773 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 NOTOA8MTQ0 251 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 TMEM114B3SHH9 223 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 EEF2KO00418 725 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CBFA2T3O75081 653 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 OXSR1O95747 527 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 BCL10O95999 233 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 URODP06132 367 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CD247P20963 164 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 GARSP41250 739 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 LHX1P48742 406 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 PLIN5Q00G26 463 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 BNIP3Q12983 259 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ZBTB49Q6ZSB9 765 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 HERC6Q8IVU3 1022 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 DCP1BQ8IZD4 617 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CENPLQ8N0S6 344 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 ZCCHC7Q8N3Z6 543 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CPSF7Q8N684 471 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 LRCH3Q96II8 777 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 SLC45A3Q96JT2 553 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 COX4I2Q96KJ9 171 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 TRIM8Q9BZR9 551 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 KATNBL1Q9H079 304 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 EFCAB1Q9HAE3 211 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ABCB10Q9NRK6 738 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ATAD3AQ9NVI7 634 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 GTSE1Q9NYZ3 720 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 VPS28Q9UK41 221 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CDYLQ9Y232 598 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CARD8Q9Y2G2 431 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ZNF638Q14966 1978 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CROCCQ5TZA2 2017 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 MOXD2PA6NHM9 499 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CHEK2O96017 543 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 NPR3P17342 541 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 PSME3P61289 254 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 TXNL4AP83876 142 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 VEPH1Q14D04 833 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 OTUD3Q5T2D3 398 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 OTUD1Q5VV17 481 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 HFE2Q6ZVN8 426 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 KCNMB4Q86W47 210 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ERI1Q8IV48 349 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 SLC41A1Q8IVJ1 513 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CEP97Q8IW35 865 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 KDM1BQ8NB78 822 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CENPIQ92674 756 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 NAA50Q9GZZ1 169 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 OSBPL2Q9H1P3 480 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 POLR1BQ9H9Y6 1135 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CCDC167Q9P0B6 97 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 XPR1Q9UBH6 696 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 RUVBL2Q9Y230 463 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 PLXNA1Q9UIW2 1896 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 HTR3EA5X5Y0 456 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ZNF839A8K0R7 811 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 I6L893 689 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CCRL2O00421 344 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 PTGESO14684 152 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 HTRA2O43464 458 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 CNOT3O75175 753 aaKnown RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 BEST1O76090 585 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 SLC35E2BP0CK96 405 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 LIPMQ5VYY2 423 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 PLPP4Q5VZY2 271 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CNSTQ6PJW8 725 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 C4orf22Q6V702 233 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 ZYG11AQ6WRX3 759 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 TMEM135Q86UB9 458 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 NT5DC4Q86YG4 428 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 DENND6AQ8IWF6 608 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CATSPER1Q8NEC5 780 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 IRGQQ8WZA9 623 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 MLPHQ9BV36 600 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 MUC3BQ9H195 1237 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 CAB39Q9Y376 341 aaPredicted RBP9.11□□□□□ -0.95
TOP1-201ENST00000361337 SCN1AP35498 2009 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 FRMPD3Q5JV73 1810 aa9.11□□□□□ -0.95
TOP1-201ENST00000361337 A0A0U1RQF3 1178 aa9.1□□□□□ -0.95
TOP1-201ENST00000361337 C9JVG2 144 aa9.1□□□□□ -0.95
TOP1-201ENST00000361337 SDHDO14521 159 aa9.1□□□□□ -0.95
TOP1-201ENST00000361337 ZBTB24O43167 697 aaPredicted RBP9.1□□□□□ -0.95
TOP1-201ENST00000361337 ADAMTS4O75173 837 aa9.1□□□□□ -0.95
TOP1-201ENST00000361337 ATE1O95260 518 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms