RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 IL2P60568 153 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 FCHO2Q0JRZ9 810 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 RAB39AQ14964 217 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 TAB1Q15750 504 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 C10orf120Q5SQS8 335 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 OTOP3Q7RTS5 596 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ZFP14Q9HCL3 533 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 KLQ9UEF7 1012 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF112Q9UJU3 913 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 SPATA31C2B4DYI2 1134 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 LHX1P48742 406 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ATXN1P54253 815 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 OAZ1P54368 228 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 TYSND1Q2T9J0 566 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 GPR158Q5T848 1215 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 STYK1Q6J9G0 422 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 SPATA19Q7Z5L4 167 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 C11orf74Q86VG3 221 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ZC3H7AQ8IWR0 971 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 PHC3Q8NDX5 983 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 MRPL45Q9BRJ2 306 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 HDHD2Q9H0R4 259 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 ADPRHL2Q9NX46 363 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 H2AFY2Q9P0M6 372 aaPredicted RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 CCDC162PA2VCL2 907 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 FUOMA2VDF0 154 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 CD86P42081 329 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 RPL38P63173 70 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 DNASE1L3Q13609 305 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 DAG1Q14118 895 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 HECTD2Q5U5R9 776 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC44A2Q8IWA5 706 aaPredicted RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 OR9I1Q8NGQ6 314 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 OSMRQ99650 979 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 MUC3BQ9H195 1237 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 KAT8Q9H7Z6 458 aaKnown RBP15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 SESN1Q9Y6P5 492 aa15.97■□□□□ 0.15
CLSTN1-201ENST00000361311 DLX3O60479 287 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 TULP3O75386 442 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 WBP4O75554 376 aaKnown RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 IGFBP5P24593 272 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 QPRTQ15274 297 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 ESRP1Q6NXG1 681 aaKnown RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 KIAA0319LQ8IZA0 1049 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 INTS10Q9NVR2 710 aaKnown RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 ABI2Q9NYB9 513 aaPredicted RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 A0A1B0GW55 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 RRN3P2A6NIE6 340 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 H0Y858 1186 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 ARPC2O15144 300 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 DUX4L2P0CJ85 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 DUX4L3P0CJ86 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 DUX4L4P0CJ87 422 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 DUX4L5P0CJ88 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 DUX4L6P0CJ89 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 DUX4L7P0CJ90 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 ITGB6P18564 788 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 WNT3AP56704 352 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 RAB43Q86YS6 212 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 PLD6Q8N2A8 252 aaKnown RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 NKAPQ8N5F7 415 aaKnown RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.96■□□□□ 0.152e-8■■■□□ 14.8
CLSTN1-201ENST00000361311 DUX4Q9UBX2 424 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 SPATA2Q9UM82 520 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 MFHAS1Q9Y4C4 1052 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 ZNF541Q9H0D2 1346 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 PIPSLA2A3N6 862 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC22A1O15245 554 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 UGT2B11O75310 529 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 TALDO1P37837 337 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 PURAQ00577 322 aaKnown RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 SLC22A16Q86VW1 577 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 CENPIQ92674 756 aaPredicted RBP15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 GBA3Q9H227 469 aa15.96■□□□□ 0.15
CLSTN1-201ENST00000361311 AIREO43918 545 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 ARL2P36404 184 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 ASPAP45381 313 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 MYBPC1Q00872 1141 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 NRG1Q02297 640 aaPredicted RBP15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 SULT2A1Q06520 285 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 PAN2Q504Q3 1202 aaKnown RBP15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 AHSA2Q719I0 299 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 SAMD7Q7Z3H4 446 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 PPP3R2Q96LZ3 170 aa15.96■□□□□ 0.14
CLSTN1-201ENST00000361311 PIP5K1BO14986 540 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 DHX15O43143 795 aaKnown RBP15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 PTPN3P26045 913 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 L1CAMP32004 1257 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 NAT16Q8N8M0 369 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 GLOD4Q9HC38 313 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 KANSL3Q9P2N6 904 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 TNPO3Q9Y5L0 923 aaKnown RBP15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 BTBD19C9JJ37 291 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 H3BMM5 538 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 NOBOXO60393 691 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 PTPN1P18031 435 aaKnown RBP15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 CCR10P46092 362 aa15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 FKBP1AP62942 108 aaKnown RBP15.95■□□□□ 0.14
CLSTN1-201ENST00000361311 DPYSL2Q16555 572 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms