RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 B4GALT4O60513 344 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 VNN1O95497 513 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 ITGA2P17301 1181 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 HOXD13P35453 343 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 MOGQ16653 247 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 SLC16A10Q8TF71 515 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 PTCD2Q8WV60 388 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 SELENOMQ8WWX9 145 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 TLR8Q9NR97 1041 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 KRT87PA6NCN2 255 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 TSPAN3O60637 253 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 GAD2Q05329 585 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 TEX44Q53QW1 395 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 FSTL5Q8N475 847 aaPredicted RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 LRRC17Q8N6Y2 441 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 MIPEPQ99797 713 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 SH3BP1Q9Y3L3 701 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 TEX264Q9Y6I9 313 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 GPR182O15218 404 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 DHX15O43143 795 aaKnown RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 SPIBQ01892 262 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 CENPSQ8N2Z9 138 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 PHTF2Q8N3S3 785 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 MFSD3Q96ES6 412 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 PRDM5Q9NQX1 630 aaPredicted RBP13.95□□□□□ -0.18
SMC5-201ENST00000361138 TOR4AQ9NXH8 423 aa13.95□□□□□ -0.18
SMC5-201ENST00000361138 EI24O14681 340 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 FAM189A1O60320 539 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 MYCP01106 439 aaPredicted RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 NMBRP28336 390 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 CSNK2BP67870 215 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 IL18R1Q13478 541 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 ZCCHC8Q6NZY4 707 aaKnown RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 C11orf88Q6PI97 169 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 OTOP3Q7RTS5 596 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 ANKRD23Q86SG2 305 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 MARVELD2Q8N4S9 558 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 PDP1Q9P0J1 537 aaPredicted RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 SNX7Q9UNH6 387 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 C2CD4BA6NLJ0 364 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 ULK1O75385 1050 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 SRP54P61011 504 aaKnown RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 TMEM86AQ8N2M4 240 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 CCDC185Q8N715 623 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 PPM1MQ96MI6 270 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 SPATC1LQ9H0A9 340 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 EPB41L4BQ9H329 900 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 VPS28Q9UK41 221 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 A0A088AWK7 358 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 NPEPPSL1A6NEC2 478 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 H3BRB1 525 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 WARSP23381 471 aaKnown RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 SIM2Q14190 667 aaPredicted RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 IKBIPQ70UQ0 350 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 TREML1Q86YW5 311 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 ISOC1Q96CN7 298 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 GPR88Q9GZN0 384 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 FBXO44Q9H4M3 255 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 TUT1Q9H6E5 874 aaKnown RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 AQP12BA6NM10 295 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 RECQL4O94761 1208 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 METTL18O95568 372 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 GPR15P49685 360 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 MTA1Q13330 715 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 ZNF460Q14592 562 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 CRY1Q16526 586 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 CDC73Q6P1J9 531 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 AQP12AQ8IXF9 295 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 AAASQ9NRG9 546 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 WRAP73Q9P2S5 460 aaPredicted RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
SMC5-201ENST00000361138 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
SMC5-201ENST00000361138 STX16-NPEPL1H3BU86 382 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 BCAS2O75934 225 aaPredicted RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 ALDH1A1P00352 501 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 BDNFP23560 247 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 IL1R2P27930 398 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PPP2R1BP30154 601 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 LRRC49Q8IUZ0 686 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 OR4L1Q8NH43 312 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 MROH8Q9H579 483 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 C10orf71Q711Q0 1435 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 AGRPO00253 132 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PLK4O00444 970 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 SLC22A1O15245 554 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CKMT2P17540 419 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 ALDH4A1P30038 563 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PBLDP30039 288 aaPredicted RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 CAMK2GQ13555 558 aaPredicted RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 MYLK3Q32MK0 819 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 TMEM198Q66K66 360 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PIK3R3Q92569 461 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 YME1L1Q96TA2 773 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PEX16Q9Y5Y5 336 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms