RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CHPFQ8IZ52 775 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 C12orf29Q8N999 325 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ADAM2Q99965 735 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 C1QTNF7Q9BXJ2 289 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 MAP2P11137 1827 aaKnown RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 TCRBV7S2A1N4TA0A589 114 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 KHDRBS3O75525 346 aaKnown RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 PIRTP0C851 137 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 CTSKP43235 329 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 TAF13Q15543 124 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ZFP69Q49AA0 526 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 RBFAQ8N0V3 343 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 DUSP16Q9BY84 665 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 UNC93B1Q9H1C4 597 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 DKK3Q9UBP4 350 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 MFHAS1Q9Y4C4 1052 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 U3KQV3 271 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 WWP2O00308 870 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 LRATO95237 230 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ZNF24P17028 368 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 PTPRAP18433 802 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 CCNHP51946 323 aaPredicted RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 POLR2JP52435 117 aaKnown RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 ITGA7Q13683 1181 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 RNASEH2BQ5TBB1 312 aaKnown RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 SLC34A3Q8N130 599 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 HTRA1Q92743 480 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 MRIQ9BWK5 157 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 THRBP10828 461 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 FUT2Q10981 343 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 TEX44Q53QW1 395 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 PIGWQ7Z7B1 504 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 RNF19AQ9NV58 838 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ZNF221Q9UK13 617 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 N6AMT1Q9Y5N5 214 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ADGRB1O14514 1584 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 CHURC1-FNTBB4DL54 471 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 BCKDKO14874 412 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ITGB5P18084 799 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 CDKN2BP42772 138 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 RPS9P46781 194 aaKnown RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 FSTL1Q12841 308 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 ERICH5Q6P6B1 374 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 RNF19BQ6ZMZ0 732 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 UTS2BQ765I0 119 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 CSPG4P5Q96PW8 444 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 TINF2Q9BSI4 451 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 CADM1Q9BY67 442 aaKnown RBP14.84□□□□□ -0.03
CHD4-201ENST00000357008 PHF11Q9UIL8 331 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 IRAK3Q9Y616 596 aa14.84□□□□□ -0.03
CHD4-201ENST00000357008 GPIP06744 558 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 IGFBP5P24593 272 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 SEMA5AQ13591 1074 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 RNF44Q7L0R7 432 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 PTCD2Q8WV60 388 aaKnown RBP14.83□□□□□ -0.03
CHD4-201ENST00000357008 PPP1R16AQ96I34 528 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 AASDHPPTQ9NRN7 309 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 PTTG2Q9NZH5 202 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 IFT80Q9P2H3 777 aaPredicted RBP14.83□□□□□ -0.03
CHD4-201ENST00000357008 HES2Q9Y543 173 aa14.83□□□□□ -0.03
CHD4-201ENST00000357008 CASKO14936 926 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 TYSND1Q2T9J0 566 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 FNDC3BQ53EP0 1204 aaKnown RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 ZYG11AQ6WRX3 759 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 CENPNQ96H22 339 aaPredicted RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 SLC9A7Q96T83 725 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 KCNU1A8MYU2 1149 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 CCNYL3P0C7X3 344 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 KLRC2P26717 231 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 HKDC1Q2TB90 917 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 HECTD2Q5U5R9 776 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 C15orf52Q6ZUT6 534 aaKnown RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 RAB43Q86YS6 212 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 PDGFDQ9GZP0 370 aaPredicted RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 ADGRB2O60241 1585 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 VWDEQ8N2E2 1590 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 MATN2O00339 956 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 RGS20O76081 388 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 MC4RP32245 332 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 PUDPQ08623 228 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 CNSTQ6PJW8 725 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 DEF8Q6ZN54 512 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 TPGS1Q6ZTW0 290 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 LENG8Q96PV6 779 aaPredicted RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 AGO1Q9UL18 857 aaKnown RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 FAM240BA0A1B0GVZ2 78 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 CCDC189A1A4V9 331 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 RPL4P36578 427 aaKnown RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 GNPDA1P46926 289 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 GMFBP60983 142 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 MON1BQ7L1V2 547 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 RASAL3Q86YV0 1011 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 SIX5Q8N196 739 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 PLD5Q8N7P1 536 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 PPM1MQ96MI6 270 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms