RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 A0A0D9SEW6 157 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 KCNQ1P51787 676 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 ZNF140P52738 457 aaPredicted RBP22.11■■□□□ 1.13
UPF3A-201ENST00000351487 SH3BP2P78314 561 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 TLR1Q15399 786 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 OR4D1Q15615 310 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 SPATA24Q86W54 205 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 ABI1Q8IZP0 508 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 FAM156AQ8NDB6 213 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 C2orf15Q8WU43 125 aaKnown RBP22.11■■□□□ 1.13
UPF3A-201ENST00000351487 PSKH2Q96QS6 385 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 PKP2Q99959 881 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 TTLL2Q9BWV7 592 aa22.11■■□□□ 1.13
UPF3A-201ENST00000351487 NLE1Q9NVX2 485 aaPredicted RBP22.11■■□□□ 1.13
UPF3A-201ENST00000351487 ENO4A6NNW6 628 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 TXNDC9O14530 226 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 NRP2O60462 931 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 DNAJA2O60884 412 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CDK14O94921 469 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 TSPAN8P19075 237 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 TCN1P20061 433 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-201ENST00000351487 GNA12Q03113 381 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 TRAP1Q12931 704 aaKnown RBP22.1■■□□□ 1.13
UPF3A-201ENST00000351487 PAOXQ6QHF9 649 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 RAB44Q7Z6P3 723 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-201ENST00000351487 TMEM102Q8N9M5 508 aaPredicted RBP22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CDKN2AIPNLQ96HQ2 116 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CENPKQ9BS16 269 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 SEPT3Q9UH03 358 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 DNAJC15Q9Y5T4 150 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 C15orf38-AP3S2A0A0A6YYH1 394 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 MRASO14807 208 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 ACSL4O60488 711 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 PIRTP0C851 137 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 HDCP19113 662 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 PSMA3P25788 255 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 SLC6A4P31645 630 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 LIN52Q52LA3 116 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 FUT10Q6P4F1 479 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 ARPINQ7Z6K5 226 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CFAP52Q8N1V2 620 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 SLC43A3Q8NBI5 491 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 RIN3Q8TB24 985 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 C3orf30Q96M34 536 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CASD1Q96PB1 797 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CDK5RAP1Q96SZ6 601 aaKnown RBP22.1■■□□□ 1.13
UPF3A-201ENST00000351487 CD300AQ9UGN4 299 aa22.1■■□□□ 1.13
UPF3A-201ENST00000351487 H3BMM5 538 aa22.09■■□□□ 1.13
UPF3A-201ENST00000351487 CRTAMO95727 393 aa22.09■■□□□ 1.13
UPF3A-201ENST00000351487 ALDOCP09972 364 aaKnown RBP22.09■■□□□ 1.13
UPF3A-201ENST00000351487 CDH13P55290 713 aa22.09■■□□□ 1.13
UPF3A-201ENST00000351487 STX1BP61266 288 aa22.09■■□□□ 1.13
UPF3A-201ENST00000351487 EXT2Q93063 718 aa22.09■■□□□ 1.13
UPF3A-201ENST00000351487 RNF186Q9NXI6 227 aa22.09■■□□□ 1.13
UPF3A-201ENST00000351487 ATP6AP2A0A1C7CYW4 349 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 SLC38A8A6NNN8 435 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 UBXN8O00124 270 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ATP6AP2O75787 350 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ATF6P18850 670 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 PMLP29590 882 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 HSPA13P48723 471 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 SLC11A1P49279 550 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 CLCN2P51788 898 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ATXN3P54252 364 aaPredicted RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 DUSP4Q13115 394 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 RTP2Q5QGT7 225 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 KANK2Q63ZY3 851 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 OR7D4Q8NG98 312 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 OR9I1Q8NGQ6 314 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 KIAA1191Q96A73 305 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 SYTL2Q9HCH5 934 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 TMEM181Q9P2C4 612 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 CNOT11Q9UKZ1 510 aaKnown RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 PRORSD1PA6NEY8 169 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 BBIP1A8MTZ0 92 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 H3BNC9 293 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 KERAO60938 352 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ALDH2P05091 517 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 GPX3P22352 226 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 CDH4P55283 916 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 RHDQ02161 417 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ELAVL2Q12926 359 aaKnown RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 SLC30A9Q6PML9 568 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 AFTPHQ6ULP2 937 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 FUNDC1Q8IVP5 155 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 RYBPQ8N488 228 aaPredicted RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ZNF483Q8TF39 744 aaPredicted RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 LPGAT1Q92604 370 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 ROPN1LQ96C74 230 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 DUS3LQ96G46 650 aaKnown RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 DERL2Q9GZP9 239 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 AKTIPQ9H8T0 292 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 FBRSL1Q9HCM7 1045 aaKnown RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 PAPOLBQ9NRJ5 636 aaKnown RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 UBA2Q9UBT2 640 aaPredicted RBP22.08■■□□□ 1.13
UPF3A-201ENST00000351487 DNMT3LQ9UJW3 386 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 CROTQ9UKG9 612 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 MED16Q9Y2X0 877 aa22.08■■□□□ 1.13
UPF3A-201ENST00000351487 H7C4K7 107 aa22.07■■□□□ 1.12
UPF3A-201ENST00000351487 AZIN1O14977 448 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms