RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TRDMT1O14717 391 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 GRID2O43424 1007 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ATG13O75143 517 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 EGFRP00533 1210 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ADRB2P07550 413 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 GSTO1P78417 241 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ALDH6A1Q02252 535 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 INCA1Q0VD86 236 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 AP3B2Q13367 1082 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 BCL7AQ4VC05 210 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 REP15Q6BDI9 236 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 FIP1L1Q6UN15 594 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ARSKQ6UWY0 536 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 SH3BP5LQ7L8J4 393 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 HORMAD1Q86X24 394 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ADGRF4Q8IZF3 695 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ATXN7L3BQ96GX2 97 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TSNARE1Q96NA8 513 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TRAF4Q9BUZ4 470 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TNKS2Q9H2K2 1166 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 SMOC2Q9H3U7 446 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 IL1RL2Q9HB29 575 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 FANCFQ9NPI8 374 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 XPNPEP3Q9NQH7 507 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 PRDM8Q9NQV8 689 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 IARS2Q9NSE4 1012 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 MTMR4Q9NYA4 1195 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 NPAP1Q9NZP6 1156 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 GMEB2Q9UKD1 530 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ZNFX1Q9P2E3 1918 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 NRXN2Q9P2S2 1712 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 AGAP5A6NIR3 686 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TMEM233B4DJY2 109 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 NFKBIEO00221 500 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TFECO14948 347 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 APOA1P02647 267 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CHRNA1P02708 482 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CYP2C8P10632 490 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 IL7P13232 177 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 IL10P22301 178 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TALDO1P37837 337 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 EPS8Q12929 822 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CA9Q16790 459 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 KIAA1324Q6UXG2 1013 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 NRARPQ7Z6K4 114 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 FAM35AQ86V20 835 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 NIM1KQ8IY84 436 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 TMC2Q8TDI7 906 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CPB2Q96IY4 423 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 GATA5Q9BWX5 397 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ASPSCR1Q9BZE9 553 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ILKAPQ9H0C8 392 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 SNX15Q9NRS6 342 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 PAK1IP1Q9NWT1 392 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CCDC167Q9P0B6 97 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 EIF3KQ9UBQ5 218 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 IP6K2Q9UHH9 426 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 NUFIP1Q9UHK0 495 aaKnown RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 ZDHHC2Q9UIJ5 367 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 RIMKLBQ9ULI2 386 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CDYLQ9Y232 598 aa10.65□□□□□ -0.7
CAPN3-203ENST00000349748 MAGED1Q9Y5V3 778 aaPredicted RBP10.65□□□□□ -0.7
CAPN3-203ENST00000349748 CCDC78A2IDD5 438 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 C3orf70A6NLC5 250 aaPredicted RBP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 TFEBP19484 476 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 CDH5P33151 784 aaPredicted RBP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 PSMD8P48556 350 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 UBE3AQ05086 875 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 PARP15Q460N3 678 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 TIFABQ6ZNK6 161 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 C1orf186Q6ZWK4 172 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 VN1R5Q7Z5H4 357 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 PLD3Q8IV08 490 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 TBC1D21Q8IYX1 336 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 SAMD14Q8IZD0 417 aaPredicted RBP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 SMG8Q8ND04 991 aaKnown RBP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 DEDD2Q8WXF8 326 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 TEX13BQ9BXU2 312 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 TRIM8Q9BZR9 551 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 ZFP14Q9HCL3 533 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 TRMT13Q9NUP7 481 aaKnown RBP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 OPTCQ9UBM4 332 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 DCDC2Q9UHG0 476 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 SCAF8Q9UPN6 1271 aaKnown RBP10.65□□□□□ -0.71
CAPN3-203ENST00000349748 SNX5Q9Y5X3 404 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 GJA3Q9Y6H8 435 aa10.65□□□□□ -0.71
CAPN3-203ENST00000349748 PABPN1LA6NDY0 278 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF99A8MXY4 864 aaPredicted RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 USP17L10C9JJH3 530 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 MAP3K6O95382 1288 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PAHP00439 452 aa10.64□□□□□ -0.71
CAPN3-203ENST00000349748 PSMA4P25789 261 aaKnown RBP10.64□□□□□ -0.71
CAPN3-203ENST00000349748 MAP2K4P45985 399 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms