RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SLC25A52Q3SY17 297 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 SFRP1Q8N474 314 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 MYRFLQ96LU7 910 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 CYP4F12Q9HCS2 524 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 KLQ9UEF7 1012 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 KLHL3Q9UH77 587 aa18.67■□□□□ 0.58
SCARF1-202ENST00000348987 MTF2Q9Y483 593 aaPredicted RBP18.67■□□□□ 0.58
SCARF1-202ENST00000348987 PIRO00625 290 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 JUNBP17275 347 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 AXLP30530 894 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 RPL34P49207 117 aaKnown RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 BROXQ5VW32 411 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ARMCX6Q7L4S7 300 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 STRADAQ7RTN6 431 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 OSTM1Q86WC4 334 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ANKRD13BQ86YJ7 626 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 FUNDC1Q8IVP5 155 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 Q8N9G6 341 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 NRBF2Q96F24 287 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 YTHDF1Q9BYJ9 559 aaKnown RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 PIGVQ9NUD9 493 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ANKMY1Q9P2S6 941 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ACOT9Q9Y305 439 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ZSWIM8A7E2V4 1837 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 M0QYT0 321 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 NPHS1O60500 1241 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 MMP3P08254 477 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 MTHFD1P11586 935 aaKnown RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 NMBRP28336 390 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 SNX16P57768 344 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ATP6V0D1P61421 351 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 CAPRIN1Q14444 709 aaKnown RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 CYP51A1Q16850 503 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 IQSEC1Q6DN90 963 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 TBPL2Q6SJ96 375 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 CRTC3Q6UUV7 619 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 CEP97Q8IW35 865 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 TRPV3Q8NET8 790 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ZFP90Q8TF47 636 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 NACA2Q9H009 215 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ADNPQ9H2P0 1102 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 SNX25Q9H3E2 840 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 MEAF6Q9HAF1 191 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 POLE4Q9NR33 117 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 KLHL8Q9P2G9 620 aaPredicted RBP18.66■□□□□ 0.58
SCARF1-202ENST00000348987 COL1A2P08123 1366 aa18.66■□□□□ 0.58
SCARF1-202ENST00000348987 ALOX5P09917 674 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 C7P10643 843 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 ADARB1P78563 741 aaKnown RBP18.65■□□□□ 0.58
SCARF1-202ENST00000348987 TUBA3CQ13748 450 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 GPR78Q96P69 363 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 FUNDC2Q9BWH2 189 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 TRIM15Q9C019 465 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 LRRC4Q9HBW1 653 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 MAP10Q9P2G4 905 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 ATP11BQ9Y2G3 1177 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 DERAQ9Y315 318 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 VWA7Q9Y334 891 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 C9JVG2 144 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 INPP4BO15327 924 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 XYLBO75191 536 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 PGK1P00558 417 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 LEPRP48357 1165 aaKnown RBP18.65■□□□□ 0.58
SCARF1-202ENST00000348987 CARTPTQ16568 116 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 HACD2Q6Y1H2 254 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 PIWIL4Q7Z3Z4 852 aaKnown RBP18.65■□□□□ 0.58
SCARF1-202ENST00000348987 DGCR6LQ9BY27 220 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 ATP13A3Q9H7F0 1226 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 AKIP1Q9NQ31 210 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 TRPV5Q9NQA5 729 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 HACD3Q9P035 362 aa18.65■□□□□ 0.58
SCARF1-202ENST00000348987 PSMD11O00231 422 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 MSI1O43347 362 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 RSL1D1O76021 490 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 AHSGP02765 367 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 GLUD2P49448 558 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 NKX2-5P52952 324 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 MAPRE1Q15691 268 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 OTUD3Q5T2D3 398 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 NOTUMQ6P988 496 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 PAQR9Q6ZVX9 377 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 DPP9Q86TI2 863 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 PSTKQ8IV42 348 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 ARRDC4Q8NCT1 418 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 APPL2Q8NEU8 664 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 EMID1Q96A84 441 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 FKBP10Q96AY3 582 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 ING2Q9H160 280 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 MTRRQ9UBK8 725 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 PIN4Q9Y237 131 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 A6NL46 340 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 ARPC2O15144 300 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 SHMT2P34897 504 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 ARL13BQ3SXY8 428 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 VPS26BQ4G0F5 336 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 VASH1Q7L8A9 365 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 IFNEQ86WN2 208 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 PARP8Q8N3A8 854 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 B3GALNT2Q8NCR0 500 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms