RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 OR52K2Q8NGK3 314 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 GPR152Q8TDT2 470 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 C5orf34Q96MH7 638 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 DEFB118Q96PH6 123 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 IRAK3Q9Y616 596 aa23.1■■□□□ 1.29
NPAS3-201ENST00000346562 OR5F1O95221 314 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 QPRTQ15274 297 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 PPP1R26Q5T8A7 1209 aaPredicted RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 RNF43Q68DV7 783 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 ESRP1Q6NXG1 681 aaKnown RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 CREG2Q8IUH2 290 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 RASSF1Q9NS23 344 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SSR3Q9UNL2 185 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 NPEPPSL1A6NEC2 478 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 YDJCA8MPS7 323 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 RPP40O75818 363 aaKnown RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 LDOC1O95751 146 aaPredicted RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SMCO1Q147U7 214 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SLC25A52Q3SY17 297 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 NAIF1Q69YI7 327 aaPredicted RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 XPR1Q9UBH6 696 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 BCL9O00512 1426 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 BBIP1A8MTZ0 92 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 CAPN15O75808 1086 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SPATA19Q7Z5L4 167 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 ZNF398Q8TD17 642 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 CCNB1IP1Q9NPC3 277 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 CCL16O15467 120 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 NOMO3P69849 1222 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SLC25A3Q00325 362 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 ZIK1Q3SY52 487 aaPredicted RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 ATCAYQ86WG3 371 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 QKIQ96PU8 341 aaKnown RBP eCLIP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 LGMNQ99538 433 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 HDAC3O15379 428 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 MBTD1Q05BQ5 628 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 LAPTM5Q13571 262 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SCIMPQ6UWF3 145 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 CHST9Q7L1S5 443 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 ZBTB2Q8N680 514 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 ADAMTS15Q8TE58 950 aa23.09■■□□□ 1.29
NPAS3-201ENST00000346562 GPC6Q9Y625 555 aaPredicted RBP23.09■■□□□ 1.29
NPAS3-201ENST00000346562 SLC22A3O75751 556 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 ACLYP53396 1101 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 GRB14Q14449 540 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 CKLFQ9UBR5 152 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 AGLP35573 1532 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 FAM86C2PA6NEL3 165 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 TNFRSF21O75509 655 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 CASP5P51878 434 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 FMO1Q01740 532 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 SUZ12Q15022 739 aaKnown RBP23.08■■□□□ 1.29
NPAS3-201ENST00000346562 SF1Q15637 639 aaKnown RBP23.08■■□□□ 1.29
NPAS3-201ENST00000346562 PTCHD4Q6ZW05 846 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 KCNS3Q9BQ31 491 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 MTRRQ9UBK8 725 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 MAGEL2Q9UJ55 1249 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 VWA7Q9Y334 891 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 CTBP1Q13363 440 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 PJA1Q8NG27 643 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 FBXO5Q9UKT4 447 aa23.08■■□□□ 1.29
NPAS3-201ENST00000346562 PSMD11O00231 422 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 SPATA31D3P0C874 917 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 TSPAN8P19075 237 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 PTPN9P43378 593 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 WNT3AP56704 352 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 DDR1Q08345 913 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 SPATA31D4Q6ZUB0 917 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 PIK3C3Q8NEB9 887 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 CDH19Q9H159 772 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 C15orf41Q9Y2V0 281 aa23.08■■□□□ 1.28
NPAS3-201ENST00000346562 IQCMA0A1B0GVH7 501 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 BRCC3P46736 316 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 ITGA7Q13683 1181 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 C9orf64Q5T6V5 341 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 VSTM1Q6UX27 236 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 C1QTNF1Q9BXJ1 281 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 ELOVL2Q9NXB9 296 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 MEIS2O14770 477 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 TRBC1P01850 177 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 PRNPP04156 253 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 SERPINA6P08185 405 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 MMP3P08254 477 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 BCAP31P51572 246 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 ZNF155Q12901 538 aaPredicted RBP23.07■■□□□ 1.28
NPAS3-201ENST00000346562 XKR4Q5GH76 650 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 SAMD4AQ9UPU9 718 aaKnown RBP23.07■■□□□ 1.28
NPAS3-201ENST00000346562 B4GALT5O43286 388 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 CAPGP40121 348 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 CCNYL2Q5T2Q4 361 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 B3GNT6Q6ZMB0 384 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 ANKRD23Q86SG2 305 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 PIH1D2Q8WWB5 315 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 ZDHHC4Q9NPG8 344 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 XKRYO14609 159 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 HAT1O14929 419 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 TEAD4Q15561 434 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 RTL4Q6ZR62 310 aa23.07■■□□□ 1.28
NPAS3-201ENST00000346562 PTCD2Q8WV60 388 aaKnown RBP23.07■■□□□ 1.28
NPAS3-201ENST00000346562 BRINP2Q9C0B6 783 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms