RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CACNA2D2Q9NY47 1150 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 UBA2Q9UBT2 640 aaPredicted RBP14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 DNMT3LQ9UJW3 386 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 AK5Q9Y6K8 562 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 TET1Q8NFU7 2136 aa14.88□□□□□ -0.03
VIPAS39-202ENST00000343765 UNC80Q8N2C7 3258 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 MOXD2PA6NHM9 499 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 CASQ2O14958 399 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SNUPNO95149 360 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SELPP16109 830 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 ATP5C1P36542 298 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 STC1P52823 247 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 FOXA1P55317 472 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 ACVR1Q04771 509 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 TNK2Q07912 1038 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 KIF19Q2TAC6 998 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 OGFRL1Q5TC84 451 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 GLT6D1Q7Z4J2 308 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 STON2Q8WXE9 905 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 CDKN2AIPNLQ96HQ2 116 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 PRICKLE1Q96MT3 831 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 GBP5Q96PP8 586 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 TTPALQ9BTX7 342 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 C6orf203Q9P0P8 240 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SRRDQ9UH36 339 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 GREB1Q4ZG55 1949 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 NCF1BA6NI72 391 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 NCF1CA8MVU1 366 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SUPT3HB4E1H0 165 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SUPT3HO75486 399 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 HSPA1AP0DMV8 641 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 HSPA1BP0DMV9 641 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 NCF1P14598 390 aaPredicted RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 OXCT1P55809 520 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 FOLH1Q04609 750 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 GPNMBQ14956 572 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 DDIASQ8IXT1 998 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 LILRA2Q8N149 483 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 BBS5Q8N3I7 341 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 EFHBQ8N7U6 833 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 LPCAT1Q8NF37 534 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 TRPC4APQ8TEL6 797 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 L3HYPDHQ96EM0 354 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SLC45A3Q96JT2 553 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 PKP2Q99959 881 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 AARSD1Q9BTE6 412 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 ZBED2Q9BTP6 218 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 SEPT3Q9UH03 358 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 VPS28Q9UK41 221 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 PCDHGC4Q9Y5F7 938 aa14.87□□□□□ -0.03
VIPAS39-202ENST00000343765 GALTP07902 379 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 SNRPB2P08579 225 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 ALDOCP09972 364 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 ZDHHC11BP0C7U3 371 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 SLC11A2P49281 568 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 STX5Q13190 355 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 RFTN1Q14699 578 aaPredicted RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 PITRM1Q5JRX3 1037 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 PAQR3Q6TCH7 311 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 LINGO4Q6UY18 593 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 FBXO22Q8NEZ5 403 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 TRIB3Q96RU7 358 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 MGME1Q9BQP7 344 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 IL1RL2Q9HB29 575 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 BPIFA1Q9NP55 256 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 BTRCQ9Y297 605 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 TRIM38O00635 465 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 MRASO14807 208 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 DNAJA2O60884 412 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 BCAS2O75934 225 aaPredicted RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 SRP72O76094 671 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 CDK14O94921 469 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 RHOCP08134 193 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 OR1D2P34982 312 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 ADGRE1Q14246 886 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 RARS2Q5T160 578 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 RAB44Q7Z6P3 723 aaPredicted RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 GALNT4Q8N4A0 578 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 MDGA1Q8NFP4 955 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 ATP6V1E2Q96A05 226 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 TSC22D3Q99576 134 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 TRMOQ9BU70 441 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 CCDC68Q9H2F9 335 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 AKTIPQ9H8T0 292 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 PDP2Q9P2J9 529 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 TSR3Q9UJK0 312 aaKnown RBP14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 IKZF3Q9UKT9 509 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 DNAJC15Q9Y5T4 150 aa14.86□□□□□ -0.03
VIPAS39-202ENST00000343765 A0A1B0GTL3 188 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ACOT8O14734 319 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 PIP5K1BO14986 540 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 COCHO43405 550 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 ALDH1A1P00352 501 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 KLKB1P03952 638 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 MTHFD2P13995 350 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 CORO1AP31146 461 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 INHBCP55103 352 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 LRP8Q14114 963 aa14.85□□□□□ -0.03
VIPAS39-202ENST00000343765 PDK3Q15120 406 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms