RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 C19orf60Q96EN9 201 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ZMAT2Q96NC0 199 aaKnown RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 LRRC4Q9HBW1 653 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 PRDM8Q9NQV8 689 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 FAM47E-STBD1D6RA91 191 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 H0Y858 1186 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ABCB7O75027 752 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 IPO13O94829 963 aaKnown RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 FARP2O94887 1054 aaPredicted RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 CPNE6O95741 557 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 BMP4P12644 408 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 CHRNA4P43681 627 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 FKBP1AP62942 108 aaKnown RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 RBP5P82980 135 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ADIGQ0VDE8 80 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 DHRS1Q96LJ7 313 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 CEP44Q9C0F1 390 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 EML4Q9HC35 981 aaKnown RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 TLR9Q9NR96 1032 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ACTR3BQ9P1U1 418 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 NUDT5Q9UKK9 219 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 B3GNT3Q9Y2A9 372 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 FXYD1O00168 92 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 DIO3P55073 304 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ADARB1P78563 741 aaKnown RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 GTF2IRD2BQ6EKJ0 949 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 GTF2IRD2Q86UP8 949 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 SLC2A14Q8TDB8 520 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ANKRD49Q8WVL7 239 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ELMO1Q92556 727 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 FDXACB1Q9BRP7 624 aaPredicted RBP14.87□□□□□ -0.03
CLCN1-201ENST00000343257 ALG2Q9H553 416 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 SPC25Q9HBM1 224 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 PCDHB3Q9Y5E6 796 aa14.87□□□□□ -0.03
CLCN1-201ENST00000343257 CLDN5O00501 218 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 PIP5K1BO14986 540 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 PMPCBO75439 489 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 CAPN15O75808 1086 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 DLGAP3O95886 979 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 MXD4Q14582 209 aaPredicted RBP14.86□□□□□ -0.03
CLCN1-201ENST00000343257 FAM160B1Q5W0V3 765 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 NEPROQ6NW34 567 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 LARP4Q71RC2 724 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLCN1-201ENST00000343257 SH3RF2Q8TEC5 729 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 BIRC7Q96CA5 298 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 HGH1Q9BTY7 390 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 PCDHGA8Q9Y5G5 932 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 PCDHGA3Q9Y5H0 932 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 MGAMO43451 1857 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 XPNPEP2O43895 674 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 SERPINB1P30740 379 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
CLCN1-201ENST00000343257 IL1RL1Q01638 556 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 PKDCCQ504Y2 493 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 ATAD3BQ5T9A4 648 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 FRA10AC1Q70Z53 315 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 RHOBTB2Q9BYZ6 727 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 TP63Q9H3D4 680 aaPredicted RBP14.86□□□□□ -0.03
CLCN1-201ENST00000343257 TOR3AQ9H497 397 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 ACAD9Q9H845 621 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 PIGVQ9NUD9 493 aa14.86□□□□□ -0.03
CLCN1-201ENST00000343257 SCHIP1Q9P0W5 487 aaPredicted RBP14.86□□□□□ -0.03
CLCN1-201ENST00000343257 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
CLCN1-201ENST00000343257 ZNF638Q14966 1978 aaKnown RBP14.85□□□□□ -0.03
CLCN1-201ENST00000343257 HGFP14210 728 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 PRKACGP22612 351 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 TGM1P22735 817 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 TPI1P60174 286 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 MBTD1Q05BQ5 628 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 INCA1Q0VD86 236 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 CDH17Q12864 832 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 PCSK7Q16549 785 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 C8orf82Q6P1X6 216 aaPredicted RBP14.85□□□□□ -0.03
CLCN1-201ENST00000343257 SLC16A12Q6ZSM3 486 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 OR52K2Q8NGK3 314 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 CENPIQ92674 756 aaPredicted RBP14.85□□□□□ -0.03
CLCN1-201ENST00000343257 TMBIM1Q969X1 311 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 TEX37Q96LM6 180 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 NSUN5Q96P11 429 aaKnown RBP14.85□□□□□ -0.03
CLCN1-201ENST00000343257 TUBA1CQ9BQE3 449 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 FICDQ9BVA6 458 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 GPN2Q9H9Y4 310 aaPredicted RBP14.85□□□□□ -0.03
CLCN1-201ENST00000343257 MID1IP1Q9NPA3 183 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 IGSF5Q9NSI5 407 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 SNX5Q9Y5X3 404 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 TOMM70O94826 608 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 KRT75O95678 551 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 VTNP04004 478 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 CPB1P15086 417 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 CRHBPP24387 322 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 MAP2K4P45985 399 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 DPY19L1Q2PZI1 675 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 PAGE3Q5JUK9 113 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 CATSPEREQ5SY80 951 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 ARHGAP36Q6ZRI8 547 aa14.85□□□□□ -0.03
CLCN1-201ENST00000343257 PAGE2Q7Z2X7 111 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms