RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 J3KR12 359 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 E2F3O00716 465 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 LTA4HP09960 611 aaKnown RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 ARSAP15289 507 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 DESP17661 470 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 CSNK1DP48730 415 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 CLCN7P51798 805 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 WNT3AP56704 352 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 TUBA4AP68366 448 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 PEX6Q13608 980 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 TTLL12Q14166 644 aaPredicted RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 ZNF460Q14592 562 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 DUS1LQ6P1R4 473 aaKnown RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 TMEM154Q6P9G4 183 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 BLOC1S3Q6QNY0 202 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 CTAGE3PQ8IX95 158 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 TAB3Q8N5C8 712 aaPredicted RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 SLC45A3Q96JT2 553 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 LYSMD1Q96S90 227 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 WDR55Q9H6Y2 383 aaPredicted RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 C20orf96Q9NUD7 363 aaPredicted RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 RHBDL2Q9NX52 303 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 MARCOQ9UEW3 520 aaPredicted RBP8.11□□□□□ -1.11
CFAP54-201ENST00000342887 ACOT9Q9Y305 439 aa8.11□□□□□ -1.11
CFAP54-201ENST00000342887 IGLV3-16A0A075B6K0 115 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 KERAO60938 352 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ABLIM3O94929 683 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 BDNFP23560 247 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ALDH1A3P47895 512 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 VASPP50552 380 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 SLC10A7Q0GE19 358 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 PDCD4Q53EL6 469 aaKnown RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 TMEM198Q66K66 360 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 DLEU7Q6UYE1 221 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ZNF280BQ86YH2 543 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CARNMT1Q8N4J0 409 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 MDGA1Q8NFP4 955 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 PJA1Q8NG27 643 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 TMEM125Q96AQ2 219 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 BTN2A3PQ96KV6 586 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 PSKH2Q96QS6 385 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 NDNQ99608 321 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 TMEM175Q9BSA9 504 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ZBED2Q9BTP6 218 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 C8orf4Q9NR00 106 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 LCHNA4D1U4 455 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 TRPC5OSA6NMA1 111 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 LILRB3O75022 631 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CNTN5O94779 1100 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 BMP10O95393 424 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CPNE6O95741 557 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 JCHAINP01591 159 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 RAG1P15918 1043 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 MYF6P23409 242 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 BRCC3P46736 316 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CHN2P52757 468 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ADARB1P78563 741 aaKnown RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 KDSRQ06136 332 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CACNB2Q08289 660 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 PCBP2Q15366 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 SLC36A3Q495N2 470 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 LPCAT4Q643R3 524 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 FBXL22Q6P050 247 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CALHM3Q86XJ0 350 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 SLC22A9Q8IVM8 553 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 POU5F2Q8N7G0 328 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 PYDC1Q8WXC3 89 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 NUSAP1Q9BXS6 441 aaKnown RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ZYG11BQ9C0D3 744 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 FAM49AQ9H0Q0 323 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 INIPQ9NRY2 104 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 KLHL8Q9P2G9 620 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 LHX3Q9UBR4 397 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 MAGED2Q9UNF1 606 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 TET1Q8NFU7 2136 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 KCNE1BA0A087WTH5 132 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 AQP12BA6NM10 295 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 NME4O00746 187 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 KDELR3O43731 214 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 CREB3O43889 395 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 GJB3O75712 270 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 EPHA3P29320 983 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 MNX1P50219 401 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ASPHQ12797 758 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 GPR17Q13304 367 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 FAM219BQ5XKK7 198 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 LAIR2Q6ISS4 152 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ZNF280DQ6N043 979 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 SDCCAG8Q86SQ7 713 aaPredicted RBP8.1□□□□□ -1.11
CFAP54-201ENST00000342887 AQP12AQ8IXF9 295 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 ADGRG5Q8IZF4 528 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 FAM110BQ8TC76 370 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 LRRC3Q9BY71 257 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 SEZ6LQ9BYH1 1024 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 NTN4Q9HB63 628 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 AIG1Q9NVV5 245 aa8.1□□□□□ -1.11
CFAP54-201ENST00000342887 SPATA7Q9P0W8 599 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms