RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SPP2Q13103 211 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 PITRM1Q5JRX3 1037 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 TJAP1Q5JTD0 557 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 CATSPEREQ5SY80 951 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 ZNF566Q969W8 418 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 VPS39Q96JC1 886 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 GPR22Q99680 433 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 TRIM54Q9BYV2 358 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 CHRAC1Q9NRG0 131 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 KIAA1257Q9ULG3 409 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 AGAP5A6NIR3 686 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 SNTNA6NMZ2 147 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 DGAT1O75907 488 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 TSPAN9O75954 239 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 HTR3AP46098 478 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 AP2S1P53680 142 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 ATN1P54259 1190 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 OR2B6P58173 313 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 BNC1Q01954 994 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 TKFCQ3LXA3 575 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 TMEM236Q5W0B7 351 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 BEND5Q7L4P6 421 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 PROSER1Q86XN7 944 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 CCDC185Q8N715 623 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 FAR1Q8WVX9 515 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 RXFP2Q8WXD0 754 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 SDCCAG3Q96C92 435 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 NXNL1Q96CM4 212 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 CCDC126Q96EE4 140 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 MSTO1Q9BUK6 570 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 GON7Q9BXV9 100 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 HES2Q9Y543 173 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 TMEM233B4DJY2 109 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 DPYSL4O14531 572 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 ANGPT2O15123 496 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 SUPT7LO94864 414 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 SPNP16150 400 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 IL7RP16871 459 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 CYP2F1P24903 491 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 ACVR2AP27037 513 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 TAGLNQ01995 201 aaKnown RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 ZIK1Q3SY52 487 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 STRADAQ7RTN6 431 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 TMEM135Q86UB9 458 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 UBQLNLQ8IYU4 475 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 CLEC4FQ8N1N0 589 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 FSTL5Q8N475 847 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 ZNF669Q96BR6 464 aaPredicted RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 MOCOSQ96EN8 888 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 ASB2Q96Q27 587 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 MCMBPQ9BTE3 642 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 SYTL2Q9HCH5 934 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 RPRD1BQ9NQG5 326 aaKnown RBP18.51■□□□□ 0.55
SMPD1-201ENST00000342245 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
SMPD1-201ENST00000342245 DDX5P17844 614 aaKnown RBP18.5■□□□□ 0.55
SMPD1-201ENST00000342245 RAD51Q06609 339 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 FADDQ13158 208 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 IL18R1Q13478 541 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 FXNQ16595 210 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ZNF404Q494X3 552 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 OTOP3Q7RTS5 596 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 BPIFB1Q8TDL5 484 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 MARVELD3Q96A59 401 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ZNF717Q9BY31 904 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-201ENST00000342245 FAM49AQ9H0Q0 323 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-201ENST00000342245 FAM118AQ9NWS6 357 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ADPRHL2Q9NX46 363 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 IL37Q9NZH6 218 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 PCDHB3Q9Y5E6 796 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 LY75O60449 1722 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 PABPN1LA6NDY0 278 aaKnown RBP18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ERVH48-1M5A8F1 160 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ARHGAP33O14559 1287 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 TULP3O75386 442 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 BBOX1O75936 387 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 PRSS23O95084 383 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 YES1P07947 543 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ENPP1P22413 925 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 UGT2B10P36537 528 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 OR3A3P47888 321 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 SEPHS1P49903 392 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ST13P50502 369 aaKnown RBP18.5■□□□□ 0.55
SMPD1-201ENST00000342245 NDST1P52848 882 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 PRKCDQ05655 676 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 IMPG1Q17R60 797 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 ZBTB33Q86T24 672 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 FLAD1Q8NFF5 587 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 FCRL3Q96P31 734 aaPredicted RBP18.5■□□□□ 0.55
SMPD1-201ENST00000342245 SLC30A3Q99726 388 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 CMTM6Q9NX76 183 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 SLC39A10Q9ULF5 831 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 CNTNAP1P78357 1384 aa18.5■□□□□ 0.55
SMPD1-201ENST00000342245 TYW5A2RUC4 315 aaKnown RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 SLC1A7O00341 560 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 TSPAN1O60635 241 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 CST3P01034 146 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 VBP1P61758 197 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 TARDBPQ13148 414 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 YIF1BQ5BJH7 314 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 OTUD3Q5T2D3 398 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms