RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 C2orf15Q8WU43 125 aaKnown RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 NAT14Q8WUY8 206 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 SEPT8Q92599 483 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 USP13Q92995 863 aaPredicted RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 VN1R3Q9BXE9 311 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 MEAF6Q9HAF1 191 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 LAMA3Q16787 3333 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 ZNF840PA6NDX5 716 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 CFLARO15519 480 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 NDST3O95803 873 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 XRCC1P18887 633 aaPredicted RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 SLC26A3P40879 764 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 BFSP2Q13515 415 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 CEACAM7Q14002 265 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 BTG3Q14201 252 aaPredicted RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 TLR1Q15399 786 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 ZNF678Q5SXM1 525 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 SETD3Q86TU7 594 aaPredicted RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 SLC22A9Q8IVM8 553 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 RNF148Q8N7C7 305 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 OR4L1Q8NH43 312 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 EXT2Q93063 718 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 WBP2Q969T9 261 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 SCLYQ96I15 445 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 NACA2Q9H009 215 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 EML4Q9HC35 981 aaKnown RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 VCX3AQ9NNX9 186 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 CREBZFQ9NS37 354 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 CATSPERZQ9NTU4 200 aa20.1■□□□□ 0.81
SPG7-202ENST00000341316 C6orf203Q9P0P8 240 aaPredicted RBP20.1■□□□□ 0.81
SPG7-202ENST00000341316 H3BMM5 538 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 SCNN1BP51168 640 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 OR4D1Q15615 310 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 UNC50Q53HI1 259 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 MRNIPQ6NTE8 343 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 BNC2Q6ZN30 1099 aaPredicted RBP20.09■□□□□ 0.81
SPG7-202ENST00000341316 RYBPQ8N488 228 aaPredicted RBP20.09■□□□□ 0.81
SPG7-202ENST00000341316 PEX13Q92968 403 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 CDKN2AIPNLQ96HQ2 116 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 PSKH2Q96QS6 385 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 SERPINI1Q99574 410 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 TMEM175Q9BSA9 504 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 WDR41Q9HAD4 459 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 COMMD3-BMI1R4GMX3 469 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 LRRC14BA6NHZ5 514 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 SUPT7LO94864 414 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 SEC24AO95486 1093 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 CDH4P55283 916 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 MRPS22P82650 360 aaKnown RBP20.09■□□□□ 0.81
SPG7-202ENST00000341316 SLC8B1Q6J4K2 584 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 PGAM4Q8N0Y7 254 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 SNX31Q8N9S9 440 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 L3HYPDHQ96EM0 354 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 ZBED2Q9BTP6 218 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 UBA2Q9UBT2 640 aaPredicted RBP20.09■□□□□ 0.81
SPG7-202ENST00000341316 SEPT3Q9UH03 358 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 TRAF6Q9Y4K3 522 aa20.09■□□□□ 0.81
SPG7-202ENST00000341316 CHD5Q8TDI0 1954 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 PPP6CO00743 305 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 OR6B1O95007 311 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 PGM3O95394 542 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 MT-CO1P00395 513 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 MYCP01106 439 aaPredicted RBP20.08■□□□□ 0.81
SPG7-202ENST00000341316 PRLP01236 227 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 SMIM18P0DKX4 95 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 HMGA1P17096 107 aaKnown RBP20.08■□□□□ 0.81
SPG7-202ENST00000341316 SLC11A2P49281 568 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 SUOXP51687 545 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 STC1P52823 247 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 CDH13P55290 713 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 MS4A2Q01362 244 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 PIP4K2CQ8TBX8 421 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 CAPNS2Q96L46 248 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 CINPQ9BW66 212 aaPredicted RBP20.08■□□□□ 0.81
SPG7-202ENST00000341316 EFCAB1Q9HAE3 211 aa20.08■□□□□ 0.81
SPG7-202ENST00000341316 KDELR3O43731 214 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 STC2O76061 302 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 ZNF37AP17032 561 aaPredicted RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 HDCP19113 662 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 CR2P20023 1033 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 ZNF140P52738 457 aaPredicted RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 OXCT1P55809 520 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 GALNT1Q10472 559 aaPredicted RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 FLOT2Q14254 428 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 ISLR2Q6UXK2 745 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 MDGA1Q8NFP4 955 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 FAR2Q96K12 515 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 AARSD1Q9BTE6 412 aaKnown RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 RNF38Q9H0F5 515 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 MTRRQ9UBK8 725 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 VPS28Q9UK41 221 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 MED16Q9Y2X0 877 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 AP1G1O43747 822 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 TSPAN3O60637 253 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 SIX3O95343 332 aaPredicted RBP20.07■□□□□ 0.8
SPG7-202ENST00000341316 EFEMP2O95967 443 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 MTHFD2P13995 350 aa20.07■□□□□ 0.8
SPG7-202ENST00000341316 PMLP29590 882 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms