RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 AAR2Q9Y312 384 aaKnown RBP19.17■□□□□ 0.66
SYNE4-202ENST00000340477 MED19A0JLT2 244 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-202ENST00000340477 FFAR2O15552 330 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 CLDN7O95471 211 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 HOXC4P09017 264 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-202ENST00000340477 C1SP09871 688 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 MYCLP1P12525 358 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-202ENST00000340477 CTSEP14091 401 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 GM2AP17900 193 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 TEAD1P28347 426 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 GPR1P46091 355 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 WNT3AP56704 352 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 PTSQ03393 145 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 DPTQ07507 201 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 EIF2B5Q13144 721 aaKnown RBP19.16■□□□□ 0.66
SYNE4-202ENST00000340477 PTPRRQ15256 657 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 ANKRD20A2Q5SQ80 823 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 TPRG1LQ5T0D9 272 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 ANKRD20A1Q5TYW2 823 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 ANKRD20A3Q5VUR7 823 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 HID1Q8IV36 788 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 ZNF548Q8NEK5 533 aaPredicted RBP19.16■□□□□ 0.66
SYNE4-202ENST00000340477 LMX1AQ8TE12 382 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 MAIP1Q8WWC4 291 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 TBATAQ96M53 351 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 GPR63Q9BZJ6 419 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 C10orf88Q9H8K7 445 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 ZFYVE1Q9HBF4 777 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 MAGEE1Q9HCI5 957 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 RAD18Q9NS91 495 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 NLGN3Q9NZ94 848 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 CD84Q9UIB8 345 aa19.16■□□□□ 0.66
SYNE4-202ENST00000340477 RGSL1A5PLK6 1076 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 ENC1O14682 589 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 AQP9O43315 295 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 EPOP01588 193 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 SLC4A1P02730 911 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 FTH1P19P0C7X4 201 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 HLA-DPA1P20036 260 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 TRIM23P36406 574 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 FAM182AQ5T1J6 154 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 TECPR1Q7Z6L1 1165 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 HEATR4Q86WZ0 1026 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 SLC13A5Q86YT5 568 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-202ENST00000340477 FSTL5Q8N475 847 aaPredicted RBP19.15■□□□□ 0.66
SYNE4-202ENST00000340477 OR56A4Q8NGH8 313 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 OR4C6Q8NH72 309 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 FUBP1Q96AE4 644 aaKnown RBP19.15■□□□□ 0.66
SYNE4-202ENST00000340477 SMIM14Q96QK8 99 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 HACD3Q9P035 362 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 MOSPD1Q9UJG1 213 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 DOLKQ9UPQ8 538 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 ZNF711Q9Y462 761 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 CSNK1G3Q9Y6M4 447 aa19.15■□□□□ 0.66
SYNE4-202ENST00000340477 LRP4O75096 1905 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 SCAMP1O15126 338 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 TNFP01375 233 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 FGF1P05230 155 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 ACTN2P35609 894 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 HK3P52790 923 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 SRP54P61011 504 aaKnown RBP19.14■□□□□ 0.65
SYNE4-202ENST00000340477 DAB2P98082 770 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 FOXC1Q12948 553 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 GSE1Q14687 1217 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 ELOCQ15369 112 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 P3H1Q32P28 736 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 PRRT3Q5FWE3 981 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 KDELC1Q6UW63 502 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 KANSL1Q7Z3B3 1105 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 LYSMD3Q7Z3D4 306 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 RD3Q7Z3Z2 195 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 CBARPQ8N350 705 aaPredicted RBP19.14■□□□□ 0.65
SYNE4-202ENST00000340477 SLC25A45Q8N413 288 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 CCDC110Q8TBZ0 833 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 SCG3Q8WXD2 468 aaKnown RBP19.14■□□□□ 0.65
SYNE4-202ENST00000340477 OXNAD1Q96HP4 312 aaPredicted RBP19.14■□□□□ 0.65
SYNE4-202ENST00000340477 PDLIM2Q96JY6 352 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 CDH19Q9H159 772 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 ABCG8Q9H221 673 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 TRABDQ9H4I3 376 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 UCKL1Q9NWZ5 548 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 NCKIPSDQ9NZQ3 722 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 SHOC2Q9UQ13 582 aa19.14■□□□□ 0.65
SYNE4-202ENST00000340477 R3HDM2Q9Y2K5 976 aaKnown RBP19.14■□□□□ 0.65
SYNE4-202ENST00000340477 A0A0U1RQS6 177 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 C5orf60A6NFR6 353 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 K7ESM1 405 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 TNFRSF10CO14798 259 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 ANXA6P08133 673 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 PIRTP0C851 137 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 PSMB4P28070 264 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 SPINT3P49223 89 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 CDK3Q00526 305 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 ALG11Q2TAA5 492 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 CCDC157Q569K6 752 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 ADAMTSL4Q6UY14 1074 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 NLRP8Q86W28 1048 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 RBFAQ8N0V3 343 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 SLC25A41Q8N5S1 370 aa19.13■□□□□ 0.65
SYNE4-202ENST00000340477 FAM71DQ8N9W8 422 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms