RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 MAGEB3O15480 346 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 GRID2O43424 1007 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 TNFAIP8O95379 198 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 ASGR1P07306 291 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 FLT3LGP49771 235 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 PSMD7P51665 324 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 APLP1P51693 650 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 CPSF6Q16630 551 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP1-201ENST00000339950 TAZQ16635 292 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 FAM151BQ6UXP7 276 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 CPNE9Q8IYJ1 553 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 SH3RF2Q8TEC5 729 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 C19orf60Q96EN9 201 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 FBXL20Q96IG2 436 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 MTG1Q9BT17 334 aaPredicted RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 TNFRSF12AQ9NP84 129 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 VPS45Q9NRW7 570 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 EIF2B4Q9UI10 523 aaKnown RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 EIF2B2P49770 351 aaKnown RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 PIGFQ07326 219 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 MSLNQ13421 630 aaPredicted RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 FAM187BQ17R55 369 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 PGS1Q32NB8 556 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 C18orf21Q32NC0 220 aaPredicted RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 PKDCCQ504Y2 493 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 DCLRE1AQ6PJP8 1040 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 SETD3Q86TU7 594 aaPredicted RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 SLC44A2Q8IWA5 706 aaPredicted RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 DDX28Q9NUL7 540 aaKnown RBP11.94□□□□□ -0.5
USP1-201ENST00000339950 KLQ9UEF7 1012 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 DGKBQ9Y6T7 804 aa11.94□□□□□ -0.5
USP1-201ENST00000339950 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 SHROOM3Q8TF72 1996 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 SYCE1LA8MT33 242 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 OR1I1O60431 355 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 OR4F21O95013 312 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 FKBP9O95302 570 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 RPL5P46777 297 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 PPM1FP49593 454 aaPredicted RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 MTTPP55157 894 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 BFSP2Q13515 415 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 DPYSQ14117 519 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 MFSD14CQ5VZR4 134 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ANKS6Q68DC2 871 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 FKBP9P1Q75LS8 142 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 BNIPLQ7Z465 357 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 SIDT2Q8NBJ9 832 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 TWIST2Q8WVJ9 160 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ELMO1Q92556 727 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 APBB2Q92870 758 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ROGDIQ9GZN7 287 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 KLHL25Q9H0H3 589 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 CATSPERZQ9NTU4 200 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 PRORSD1PA6NEY8 169 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 AZIN1O14977 448 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 NTRK1P04629 796 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 KCNC1P48547 511 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 CDKN2DP55273 166 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 OXCT1P55809 520 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 DCTN2Q13561 401 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 INTS6LQ5JSJ4 861 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 ATXN7L2Q5T6C5 722 aaPredicted RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 FBXL22Q6P050 247 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 GPR141Q7Z602 305 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 TMEM135Q86UB9 458 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 DDHD1Q8NEL9 900 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 BPIFB6Q8NFQ5 453 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 FAM162AQ96A26 154 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 UBAP1Q9NZ09 502 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 WWOXQ9NZC7 414 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ATXN10Q9UBB4 475 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 UBR3Q6ZT12 1888 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 SF3B1O75533 1304 aaKnown RBP eCLIP11.93□□□□□ -0.5
USP1-201ENST00000339950 SDHDO14521 159 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 TOR1BO14657 336 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 NBNO60934 754 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 CLASP2O75122 1294 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 ALBP02768 609 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 RHOCP08134 193 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ABCB1P08183 1280 aaPredicted RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 FASP25445 335 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 PRDX3P30048 256 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 AKT1P31749 480 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 HARS2P49590 506 aaKnown RBP11.93□□□□□ -0.5
USP1-201ENST00000339950 IST1P53990 364 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 OCA2Q04671 838 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 SULT2A1Q06520 285 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 RAD51Q06609 339 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 CDK18Q07002 472 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ADGRE1Q14246 886 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 INSCQ1MX18 579 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 TRIM16LQ309B1 348 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 LILRA2Q8N149 483 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 ATP6V0D2Q8N8Y2 350 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 GPR22Q99680 433 aa11.93□□□□□ -0.5
USP1-201ENST00000339950 SLC25A23Q9BV35 468 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms