RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 BBS5Q8N3I7 341 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 PGBD5Q8N414 524 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 PTCD2Q8WV60 388 aaKnown RBP24.36■■□□□ 1.49
CDKN3-202ENST00000335183 DTD2Q96FN9 168 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 NUDT22Q9BRQ3 303 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 FRMD8Q9BZ67 464 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-202ENST00000335183 NOD2Q9HC29 1040 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 ETNK2Q9NVF9 386 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 TRNAU1APQ9NX07 287 aaKnown RBP24.36■■□□□ 1.49
CDKN3-202ENST00000335183 PHTF1Q9UMS5 762 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 SCINQ9Y6U3 715 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 MYO18BQ8IUG5 2567 aa24.36■■□□□ 1.49
CDKN3-202ENST00000335183 A0A1W2PQC6 194 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 ZW10O43264 779 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 ITGB2P05107 769 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 CCL4P13236 92 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 CR2P20023 1033 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 LHCGRP22888 699 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 TRAF2Q12933 501 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 TMCO3Q6UWJ1 677 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 ZNF571Q7Z3V5 609 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-202ENST00000335183 C17orf82Q86X59 251 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-202ENST00000335183 PATE1Q8WXA2 126 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 JPH3Q8WXH2 748 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-202ENST00000335183 SPOCK2Q92563 424 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 HSPH1Q92598 858 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 COL26A1Q96A83 441 aa24.35■■□□□ 1.49
CDKN3-202ENST00000335183 NPIPB15A6NHN6 443 aaPredicted RBP24.34■■□□□ 1.49
CDKN3-202ENST00000335183 WISP1O95388 367 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 GZMAP12544 262 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 CD82P27701 267 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 POLD2P49005 469 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 PTPRRQ15256 657 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 DOK6Q6PKX4 331 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 Q6ZVL8 140 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 DTX1Q86Y01 620 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 ATPAF2Q8N5M1 289 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 NSMCE1Q8WV22 266 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 MGME1Q9BQP7 344 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 TRIM4Q9C037 500 aa24.34■■□□□ 1.49
CDKN3-202ENST00000335183 PSMD11O00231 422 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 PEX11BO96011 259 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 FAM87AP0C7U9 286 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 CTPS1P17812 591 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 WT1P19544 449 aaPredicted RBP24.33■■□□□ 1.49
CDKN3-202ENST00000335183 IL1R2P27930 398 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 CYP4F2P78329 520 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 NFKB2Q00653 900 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 CTBSQ01459 385 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 DPYSL2Q16555 572 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 XKR5Q6UX68 686 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 ZNF574Q6ZN55 896 aaPredicted RBP24.33■■□□□ 1.49
CDKN3-202ENST00000335183 ZNF438Q7Z4V0 828 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 POLNQ7Z5Q5 900 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 TSPAN33Q86UF1 283 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 CCDC74BQ96LY2 380 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.33■■□□□ 1.49
CDKN3-202ENST00000335183 CD84Q9UIB8 345 aa24.33■■□□□ 1.49
CDKN3-202ENST00000335183 IGHV5-10-1A0A0J9YXX1 117 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 DDX3XO00571 662 aaKnown RBP eCLIP24.32■■□□□ 1.485e-7■■■□□ 16.9
CDKN3-202ENST00000335183 HGSO14964 777 aaPredicted RBP24.32■■□□□ 1.48
CDKN3-202ENST00000335183 MAFKO60675 156 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 TCF4P15884 667 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 PCK1P35558 622 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 MMP13P45452 471 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 GPR1P46091 355 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 KLHL30Q0D2K2 578 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 NR1D2Q14995 579 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 ARMC12Q5T9G4 340 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 E4F1Q66K89 784 aaPredicted RBP24.32■■□□□ 1.48
CDKN3-202ENST00000335183 USP45Q70EL2 814 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 NAGSQ8N159 534 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 SCRN2Q96FV2 425 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 MRPL47Q9HD33 250 aaKnown RBP24.32■■□□□ 1.48
CDKN3-202ENST00000335183 RTN4Q9NQC3 1192 aaKnown RBP24.32■■□□□ 1.48
CDKN3-202ENST00000335183 ST14Q9Y5Y6 855 aa24.32■■□□□ 1.48
CDKN3-202ENST00000335183 A0A0U1RQS6 177 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 STMND1H3BQB6 276 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 PGLSO95336 258 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 IVLP07476 585 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 CD1CP29017 333 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 ADCY8P40145 1251 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 ACTR1BP42025 376 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 ACTR1AP61163 376 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 PEX6Q13608 980 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 TBR1Q16650 682 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 CLPPQ16740 277 aaPredicted RBP24.31■■□□□ 1.48
CDKN3-202ENST00000335183 BOLA3Q53S33 107 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 MARC1Q5VT66 337 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 NKAIN2Q5VXU1 208 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 CBARPQ8N350 705 aaPredicted RBP24.31■■□□□ 1.48
CDKN3-202ENST00000335183 TRIM11Q96F44 468 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 GBP4Q96PP9 640 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 CSPG4P5Q96PW8 444 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 B3GNT4Q9C0J1 378 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 ZMYND15Q9H091 742 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 CDH19Q9H159 772 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 SLC17A4Q9Y2C5 497 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 PLEKHM1Q9Y4G2 1056 aa24.31■■□□□ 1.48
CDKN3-202ENST00000335183 PPM1DO15297 605 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms