RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 PTSQ03393 145 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 SHBQ15464 509 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 TRIP6Q15654 476 aaKnown RBP16.36■□□□□ 0.21
C11orf88-201ENST00000332814 FAXCQ5TGI0 409 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 ZNF765Q7L2R6 523 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 LYSMD3Q7Z3D4 306 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 RAVER1Q8IY67 606 aaKnown RBP16.36■□□□□ 0.21
C11orf88-201ENST00000332814 PHACTR4Q8IZ21 702 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 NRSN1Q8IZ57 195 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 C1orf54Q8WWF1 131 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 OXNAD1Q96HP4 312 aaPredicted RBP16.36■□□□□ 0.21
C11orf88-201ENST00000332814 MRGPRX2Q96LB1 330 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 FICDQ9BVA6 458 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 SLC13A1Q9BZW2 595 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 USP29Q9HBJ7 922 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 MAGEE1Q9HCI5 957 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 SPASTQ9UBP0 616 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 APOBEC3BQ9UH17 382 aaKnown RBP16.36■□□□□ 0.21
C11orf88-201ENST00000332814 MOSPD1Q9UJG1 213 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 SHOC2Q9UQ13 582 aa16.36■□□□□ 0.21
C11orf88-201ENST00000332814 PIAS2O75928 621 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 RASGRP1O95267 797 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 CSF2P04141 144 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 FGF1P05230 155 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 MYCLP1P12525 358 aaPredicted RBP16.35■□□□□ 0.21
C11orf88-201ENST00000332814 CTSEP14091 401 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 STIP1P31948 543 aaKnown RBP16.35■□□□□ 0.21
C11orf88-201ENST00000332814 SIM1P81133 766 aaPredicted RBP16.35■□□□□ 0.21
C11orf88-201ENST00000332814 SNX1Q13596 522 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 TPRG1LQ5T0D9 272 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 DBX2Q6ZNG2 339 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 RD3Q7Z3Z2 195 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 TECPR1Q7Z6L1 1165 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 HEATR4Q86WZ0 1026 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 HID1Q8IV36 788 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 SLC35F6Q8N357 371 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 EID2Q8N6I1 236 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 CCDC89Q8N998 374 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 ABCG8Q9H221 673 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 TRABDQ9H4I3 376 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 HACD3Q9P035 362 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 BTBD3Q9Y2F9 522 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 ZKSCAN5Q9Y2L8 839 aa16.35■□□□□ 0.21
C11orf88-201ENST00000332814 FRYLO94915 3013 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 TMEM131Q92545 1883 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 SPAARA0A1B0GVQ0 90 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 LOC285095A0A1B0GVY8 99 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 RGSL1A5PLK6 1076 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 GIPC1O14908 333 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 FFAR2O15552 330 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 GCATO75600 419 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 IFNB1P01574 187 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 DGKAP23743 735 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 DPTQ07507 201 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 EIF2B5Q13144 721 aaKnown RBP16.34■□□□□ 0.21
C11orf88-201ENST00000332814 SLC1A5Q15758 541 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 PARP6Q2NL67 630 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 SIRPB2Q5JXA9 342 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 ZNF548Q8NEK5 533 aaPredicted RBP16.34■□□□□ 0.21
C11orf88-201ENST00000332814 OR56A4Q8NGH8 313 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 BLOC1S5Q8TDH9 187 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 LMX1AQ8TE12 382 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 FUBP1Q96AE4 644 aaKnown RBP16.34■□□□□ 0.21
C11orf88-201ENST00000332814 PBKQ96KB5 322 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 RIOK2Q9BVS4 552 aaKnown RBP16.34■□□□□ 0.21
C11orf88-201ENST00000332814 CDH19Q9H159 772 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 FAM83DQ9H4H8 585 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 HOMER3Q9NSC5 361 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 DOLKQ9UPQ8 538 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 CACNA1EQ15878 2313 aa16.34■□□□□ 0.21
C11orf88-201ENST00000332814 TP53BP1Q12888 1972 aaPredicted RBP16.33■□□□□ 0.21
C11orf88-201ENST00000332814 E7EVH7 732 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 K7ESM1 405 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 AQP9O43315 295 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 LDOC1O95751 146 aaPredicted RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 TNFP01375 233 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 HOXC4P09017 264 aaPredicted RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 ATXN1LP0C7T5 689 aaKnown RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 TEAD1P28347 426 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 TRIM23P36406 574 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 CHRNA4P43681 627 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 SPINT3P49223 89 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 LMAN1P49257 510 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 GDF10P55107 478 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 SRP54P61011 504 aaKnown RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 CDK3Q00526 305 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 CCNG2Q16589 344 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 PRRT3Q5FWE3 981 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 ALS2CLQ60I27 953 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 GSTA5Q7RTV2 222 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 GLT6D1Q7Z4J2 308 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 RBFAQ8N0V3 343 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 CBARPQ8N350 705 aaPredicted RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 SCAMP4Q969E2 229 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 TSACCQ96A04 125 aaPredicted RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 CNDP2Q96KP4 475 aaKnown RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 NAP1L3Q99457 506 aaPredicted RBP16.33■□□□□ 0.2
C11orf88-201ENST00000332814 TBL1YQ9BQ87 522 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 DUSP23Q9BVJ7 150 aa16.33■□□□□ 0.2
C11orf88-201ENST00000332814 EVA1BQ9NVM1 165 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms