RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 CSHL1Q14406 222 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 ARL13AQ5H913 290 aaPredicted RBP9.03□□□□□ -0.96
SIMC1-201ENST00000332772 TMEM240Q5SV17 173 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 LYPLAL1Q5VWZ2 237 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 MAVSQ7Z434 540 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 ISCA2Q86U28 154 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 CBARPQ8N350 705 aaPredicted RBP9.03□□□□□ -0.96
SIMC1-201ENST00000332772 KIF2BQ8N4N8 673 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 NKAPQ8N5F7 415 aaKnown RBP9.03□□□□□ -0.96
SIMC1-201ENST00000332772 CPSF7Q8N684 471 aaKnown RBP9.03□□□□□ -0.96
SIMC1-201ENST00000332772 TEX9Q8N6V9 391 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 ZNF781Q8N8C0 355 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 LPCAT1Q8NF37 534 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 OR4K2Q8NGD2 314 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 OR13C4Q8NGS5 318 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 LPGAT1Q92604 370 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 UTP4Q969X6 686 aaKnown RBP9.03□□□□□ -0.96
SIMC1-201ENST00000332772 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.03□□□□□ -0.96
SIMC1-201ENST00000332772 LMLNQ96KR4 655 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 NSMCE3Q96MG7 304 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 LYSMD1Q96S90 227 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 TCF25Q9BQ70 676 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 EBF4Q9BQW3 602 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 SLC46A2Q9BY10 475 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 CEP44Q9C0F1 390 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 DERL2Q9GZP9 239 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 CCDC68Q9H2F9 335 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 TAS2R1Q9NYW7 299 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 TBC1D14Q9P2M4 693 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 SPO11Q9Y5K1 396 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 CEP350Q5VT06 3117 aa9.03□□□□□ -0.96
SIMC1-201ENST00000332772 LCHNA4D1U4 455 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 SMIM24O75264 130 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 NDUFS3O75489 264 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 GJB3O75712 270 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 IGSF6O95976 241 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PDHA1P08559 390 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 TPBGLP0DKB5 382 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 ZNF37AP17032 561 aaPredicted RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 WEE1P30291 646 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PTGER3P43115 390 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 GLRBP48167 497 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 VASPP50552 380 aaPredicted RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 RAP1GDS1P52306 607 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 CDKN2DP55273 166 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 CYP4F8P98187 520 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 CACNG1Q06432 222 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 BCL2L1Q07817 233 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 UGT3A1Q6NUS8 523 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 ZNF549Q6P9A3 640 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 ATG14Q6ZNE5 492 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 TRIM67Q6ZTA4 783 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 ACAD11Q709F0 780 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 TTC7BQ86TV6 843 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 LONP2Q86WA8 852 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 BBS7Q8IWZ6 715 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 HS6ST3Q8IZP7 471 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 CMTM8Q8IZV2 173 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 LSMEM2Q8N112 164 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 TXNDC5Q8NBS9 432 aaKnown RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PIH1D2Q8WWB5 315 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 MAELQ96JY0 434 aaKnown RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 NDNQ99608 321 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 TTC1Q99614 292 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 CADM1Q9BY67 442 aaKnown RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 SLC2A11Q9BYW1 496 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 CPEB1Q9BZB8 566 aaKnown RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 ATP13A3Q9H7F0 1226 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 TCF7L2Q9NQB0 619 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 IL17CQ9P0M4 197 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 APPL1Q9UKG1 709 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 HS3ST2Q9Y278 367 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PPIL1Q9Y3C6 166 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PKP3Q9Y446 797 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PCDHB1Q9Y5F3 818 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 PCDHGC4Q9Y5F7 938 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 OAS3Q9Y6K5 1087 aaKnown RBP9.02□□□□□ -0.96
SIMC1-201ENST00000332772 SLC4A7Q9Y6M7 1214 aa9.02□□□□□ -0.96
SIMC1-201ENST00000332772 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 SYCE1LA8MT33 242 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 A8MT66 165 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 XYLBO75191 536 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 PAPLNO95428 1278 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 ESR1P03372 595 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 PKMP14618 531 aaKnown RBP9.02□□□□□ -0.97
SIMC1-201ENST00000332772 CD1DP15813 335 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 RPS3P23396 243 aaKnown RBP eCLIP9.02□□□□□ -0.97
SIMC1-201ENST00000332772 GMPRP36959 345 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 EPHB1P54762 984 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 ALDH18A1P54886 795 aaKnown RBP9.02□□□□□ -0.97
SIMC1-201ENST00000332772 SNRPD1P62314 119 aaKnown RBP9.02□□□□□ -0.97
SIMC1-201ENST00000332772 TIAL1Q01085 375 aaKnown RBP eCLIP9.02□□□□□ -0.97
SIMC1-201ENST00000332772 LMAN2Q12907 356 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 PDAP1Q13442 181 aaKnown RBP9.02□□□□□ -0.97
SIMC1-201ENST00000332772 SEMA3AQ14563 771 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 ZNF460Q14592 562 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 CRY1Q16526 586 aa9.02□□□□□ -0.97
SIMC1-201ENST00000332772 ZDHHC20Q5W0Z9 365 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms