RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 CMC1Q7Z7K0 106 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SPPL2CQ8IUH8 684 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SIAH1Q8IUQ4 282 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 GALNT12Q8IXK2 581 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CCDC185Q8N715 623 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PCDH19Q8TAB3 1148 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 RORBQ92753 470 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SLC39A13Q96H72 371 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 REXO5Q96IC2 774 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 IL12RB2Q99665 862 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 APOL4Q9BPW4 351 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 IRF2BPLQ9H1B7 796 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 TASP1Q9H6P5 420 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 TNFRSF10DQ9UBN6 386 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 FBXO9Q9UK97 447 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 SPEF1Q9Y4P9 236 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PMF1-BGLAPU3KQ54 211 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 A8MU76 341 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 LOC110117498-PIK3R3F6TDL0 507 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 TSPAN1O60635 241 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CLIC3O95833 236 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 IL32P24001 234 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 YAP1P46937 504 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 PICALMQ13492 652 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PLCL1Q15111 1095 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CYP51A1Q16850 503 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 DPY19L1Q2PZI1 675 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ZNF404Q494X3 552 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 RBM20Q5T481 1227 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 DESI1Q6ICB0 168 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ZNF767PQ75MW2 155 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ZC3HC1Q86WB0 502 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 CCDC103Q8IW40 242 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 RIMKLAQ8IXN7 391 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 CLEC4FQ8N1N0 589 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 Q8N9G6 341 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 SLC43A3Q8NBI5 491 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PSMA8Q8TAA3 256 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 ADAM32Q8TC27 787 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 FAR1Q8WVX9 515 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 HTR3CQ8WXA8 447 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 SEPT1Q8WYJ6 367 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PIK3R3Q92569 461 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 KCTD14Q9BQ13 255 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 MRPL57Q9BQC6 102 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 ADPGKQ9BRR6 497 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 MRIQ9BWK5 157 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 FAM49AQ9H0Q0 323 aaPredicted RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 ADNPQ9H2P0 1102 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 DDX4Q9NQI0 724 aaKnown RBP8.39□□□□□ -1.07
SKA2-201ENST00000330137 CCDC167Q9P0B6 97 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 PCDHA9Q9Y5H5 950 aa8.39□□□□□ -1.07
SKA2-201ENST00000330137 EGFRP00533 1210 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 ITGB5P18084 799 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 ATP5F1P24539 256 aaPredicted RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 MGAT1P26572 445 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 SHMT2P34897 504 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 ETFBP38117 255 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 GLUD2P49448 558 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 ST13P50502 369 aaKnown RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 IKQ13123 557 aaPredicted RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 TAF5Q15542 800 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 DPYSL2Q16555 572 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 UBE2UQ5VVX9 321 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 DENND1BQ6P3S1 775 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 PEX13Q92968 403 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 GLMNQ92990 594 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 VPS35Q96QK1 796 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 COQ7Q99807 217 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 TMEM246Q9BRR3 403 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 RHOJQ9H4E5 214 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 FAM118AQ9NWS6 357 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 CCDC59Q9P031 241 aaKnown RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 SFMBT1Q9UHJ3 866 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 TCEAL9Q9UHQ7 104 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 PTPRJQ12913 1337 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 SIPA1L1O43166 1804 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 A0A087X1B8 175 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 HMX3A6NHT5 357 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 NRP1O14786 923 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 SLC16A6O15403 523 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 DLX3O60479 287 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 MED26O95402 600 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 GPX3P22352 226 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 OR3A3P47888 321 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 IKZF1Q13422 519 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 STARD3Q14849 445 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 ARHGEF16Q5VV41 709 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 LARP4Q71RC2 724 aaKnown RBP eCLIP8.38□□□□□ -1.071e-6■□□□□ 10.2
SKA2-201ENST00000330137 SLC26A9Q7LBE3 791 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 CHST15Q7LFX5 561 aaPredicted RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 STRADAQ7RTN6 431 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 TAS1R3Q7RTX0 852 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 RALGPS2Q86X27 583 aaPredicted RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 PLCZ1Q86YW0 608 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 BRSK2Q8IWQ3 736 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 SLC38A6Q8IZM9 456 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 NATD1Q8N6N6 113 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms