RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RETSATQ6NUM9 610 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 RANBP10Q6VN20 620 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 NLRP9Q7RTR0 991 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 OR52K1Q8NGK4 314 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 OR8D1Q8WZ84 308 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 CFAP36Q96G28 342 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 OXNAD1Q96HP4 312 aaPredicted RBP16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 PAFAH2Q99487 392 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 ORAI3Q9BRQ5 295 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 KIFC1Q9BW19 673 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 BTBD1Q9H0C5 482 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 NT5MQ9NPB1 228 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 NSMCE4AQ9NXX6 385 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 SOX13Q9UN79 622 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 TTLL3Q9Y4R7 772 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
PDLIM1-201ENST00000329399 ASCC3Q8N3C0 2202 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 BANF1O75531 89 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 KRT37O76014 449 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 KRT38O76015 456 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 SEMA4FO95754 770 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 IGHV4-34P06331 123 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 SERPINF2P08697 491 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 C5AR1P21730 350 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 MGAT1P26572 445 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 GCAP28676 217 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 MDH1P40925 334 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 GRIA1P42261 906 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 NSUN2Q08J23 767 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 SLC10A7Q0GE19 358 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 CYTH1Q15438 398 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 RSPO4Q2I0M5 234 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 UBAP2Q5T6F2 1119 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 USP30Q70CQ3 517 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 TRABD2AQ86V40 505 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 EXOC3L1Q86VI1 746 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 AGGF1Q8N302 714 aaeCLIP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 CADM4Q8NFZ8 388 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 DNASE2BQ8WZ79 361 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 PEX13Q92968 403 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 FAM131CQ96AQ9 280 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 BIRC7Q96CA5 298 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 RANBP9Q96S59 729 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 OMDQ99983 421 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 MGME1Q9BQP7 344 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 EIF2B4Q9UI10 523 aaKnown RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 NCOR2Q9Y618 2525 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 CABIN1Q9Y6J0 2220 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 WNT9AO14904 365 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 LEFTY1O75610 366 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 TMCC1O94876 653 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 ADH1BP00325 375 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 KRT15P19012 456 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 CA4P22748 312 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 ADRA1DP25100 572 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 HPDP32754 393 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 TAS2R38P59533 333 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 KBTBD12Q3ZCT8 623 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 TTC31Q49AM3 519 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 TRIM61Q5EBN2 209 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 CARD16Q5EG05 197 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 AGBL4Q5VU57 503 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 KDELC1Q6UW63 502 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 RGL4Q8IZJ4 473 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 OR2I1PQ8NGU4 316 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 FEM1CQ96JP0 617 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 NSMCE3Q96MG7 304 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 SMC6Q96SB8 1091 aa16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.48■□□□□ 0.23
PDLIM1-201ENST00000329399 CDX4O14627 284 aaPredicted RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 INSIG1O15503 277 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 PRPF4O43172 522 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 GJB3O75712 270 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 FSBPO95073 299 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 PAMP19021 973 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 CCNHP51946 323 aaPredicted RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 ADPRHP54922 357 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 WNT3AP56704 352 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 BNC1Q01954 994 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 ITKQ08881 620 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 MGAT5Q09328 741 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 CRYMQ14894 314 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 TMED2Q15363 201 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 FAM182AQ5T1J6 154 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 CAPN12Q6ZSI9 719 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 MARK2Q7KZI7 788 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 PCDH20Q8N6Y1 951 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 PPHLN1Q8NEY8 458 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 OR14C36Q8NHC7 312 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 DCAKDQ8WVC6 231 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms