RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 OR6Q1Q8NGQ2 317 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 C19orf60Q96EN9 201 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 BTBD2Q9BX70 525 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 C2orf40Q9H1Z8 148 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 MUC13Q9H3R2 512 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 MINDY3Q9H8M7 445 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 AKTIPQ9H8T0 292 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 SLC52A3Q9NQ40 469 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 GIMAP2Q9UG22 337 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 A6NL46 340 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ALPLP05186 524 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 THRBP10828 461 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 LCP1P13796 627 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ITIH1P19827 911 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 PCMT1P22061 227 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ICAM3P32942 547 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 NOS2P35228 1153 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 NR4A2P43354 598 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ALDH3A2P51648 485 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 STAT5BP51692 787 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 GABARAPL2P60520 117 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 PITX1P78337 314 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ECT2LQ008S8 904 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 FOXM1Q08050 763 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 DAG1Q14118 895 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CSHL1Q14406 222 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 MAPK11Q15759 364 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 FAM83EQ2M2I3 478 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 PAGE2BQ5JRK9 111 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ARMCX6Q7L4S7 300 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 RAVER1Q8IY67 606 aaKnown RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CHDHQ8NE62 594 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CAPSLQ8WWF8 208 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ALOXE3Q9BYJ1 711 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 TNFSF13BQ9Y275 285 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 PCDHGA8Q9Y5G5 932 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CITO14578 2027 aa12.77□□□□□ -0.36
CCDC60-201ENST00000327554 C16orf96A6NNT2 1141 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 GABARAPO95166 117 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 TSPAN8P19075 237 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ARNTP27540 789 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SNX16P57768 344 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ARPC4P59998 168 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 POU5F1BQ06416 359 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ADPRMQ3LIE5 342 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 RABL3Q5HYI8 236 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 AKAP14Q86UN6 197 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ARMC8Q8IUR7 673 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 C8orf59Q8N0T1 100 aaPredicted RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CLIP4Q8N3C7 705 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 TTC39CQ8N584 583 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 LILRB4Q8NHJ6 448 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 NDNFQ8TB73 568 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CCDC126Q96EE4 140 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 BDH2Q9BUT1 245 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CHID1Q9BWS9 393 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 TP63Q9H3D4 680 aaPredicted RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ALG2Q9H553 416 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 FAM124BQ9H5Z6 455 aaPredicted RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CDHR5Q9HBB8 845 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 UBP1Q9NZI7 540 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 PDE10AQ9Y233 779 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 TIMM22Q9Y584 194 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 MIA3Q5JRA6 1907 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 EVPLQ92817 2033 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 IQCF3P0C7M6 154 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SOX11P35716 441 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SCNN1AP37088 669 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SLC1A2P43004 574 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SULT1E1P49888 294 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 LIPEQ05469 1076 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CDH17Q12864 832 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ILF2Q12905 390 aaKnown RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CTU2Q2VPK5 515 aaKnown RBP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SLC10A6Q3KNW5 377 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 SMUG1Q53HV7 270 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 TAF2Q6P1X5 1199 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 MIER2Q8N344 545 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC60-201ENST00000327554 ZNF280CQ8ND82 737 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 BIRC7Q96CA5 298 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 PHF21BQ96EK2 531 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CPNE5Q9HCH3 593 aa12.77□□□□□ -0.37
CCDC60-201ENST00000327554 CHST12Q9NRB3 414 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms