RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 ECT2LQ008S8 904 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 NFYCQ13952 458 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 OXA1LQ15070 435 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 BROXQ5VW32 411 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 XAF1Q6GPH4 301 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SCIMPQ6UWF3 145 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ARHGAP36Q6ZRI8 547 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 STRADAQ7RTN6 431 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 RAB2BQ8WUD1 216 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 PPP1R13LQ8WUF5 828 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SDCCAG3Q96C92 435 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SPATA33Q96N06 139 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ZMAT2Q96NC0 199 aaKnown RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 KCTD14Q9BQ13 255 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-202ENST00000318266 FICDQ9BVA6 458 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 NDEL1Q9GZM8 345 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 CD320Q9NPF0 282 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF229Q9UJW7 825 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 SCN1AP35498 2009 aa9.66□□□□□ -0.86
PTPRA-202ENST00000318266 AQP12BA6NM10 295 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PIP5K1BO14986 540 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TPD52L2O43399 206 aaKnown RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 BEST1O76090 585 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PGK2P07205 417 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TCF3P15923 654 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ARNTP27540 789 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 HADHAP40939 763 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 GSK3BP49841 420 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TMBIM6P55061 237 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 DIO3P55073 304 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 RPS3AP61247 264 aaKnown RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PAGE2BQ5JRK9 111 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 MFSD4BQ5TF39 518 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ANKRD34AQ69YU3 496 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 METTL7BQ6UX53 244 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 LARP4Q71RC2 724 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■□□□□ 8.1
PTPRA-202ENST00000318266 SLCO6A1Q86UG4 719 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PIM3Q86V86 326 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 RALGPS2Q86X27 583 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ZDHHC17Q8IUH5 632 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 AQP12AQ8IXF9 295 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 DNERQ8NFT8 737 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 SH3RF2Q8TEC5 729 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 LRRC58Q96CX6 371 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 FEM1CQ96JP0 617 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 FAM167AQ96KS9 214 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 SNX27Q96L92 541 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TEPSINQ96N21 525 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 IL12RB2Q99665 862 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 SLC30A3Q99726 388 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 CHID1Q9BWS9 393 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ALG2Q9H553 416 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 IGSF5Q9NSI5 407 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PRMT7Q9NVM4 692 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ACTR3BQ9P1U1 418 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 KLQ9UEF7 1012 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 SEPT3Q9UH03 358 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ANAPC2Q9UJX6 822 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 FBXO5Q9UKT4 447 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 RAD54BQ9Y620 910 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 MAGEB16A2A368 324 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TRIM64A6NGJ6 449 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 NOBOXO60393 691 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ICAM3P32942 547 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 KCNC4Q03721 635 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 LIPEQ05469 1076 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 MEP1AQ16819 746 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 UGP2Q16851 508 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 INAVAQ3KP66 663 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PLA2G4EQ3MJ16 856 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TECRLQ5HYJ1 363 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 IQSEC1Q6DN90 963 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 NAPEPLDQ6IQ20 393 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 C8orf82Q6P1X6 216 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 SPRED1Q7Z699 444 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 HS3ST5Q8IZT8 346 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 HTRA1Q92743 480 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ITPKCQ96DU7 683 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 NSUN5Q96P11 429 aaKnown RBP9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ZNF347Q96SE7 839 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 PALMDQ9NP74 551 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 MYOZ2Q9NPC6 264 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 TMEM9Q9P0T7 183 aa9.65□□□□□ -0.86
PTPRA-202ENST00000318266 ZFC3H1O60293 1989 aaKnown RBP9.65□□□□□ -0.87
PTPRA-202ENST00000318266 SHROOM3Q8TF72 1996 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 CENPFP49454 3210 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 PSMD11O00231 422 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 SEC14L2O76054 403 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 INMTO95050 263 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 HGFP14210 728 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 AGXTP21549 392 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 HTR1BP28222 390 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 PAFAH1B3Q15102 231 aaKnown RBP9.65□□□□□ -0.87
PTPRA-202ENST00000318266 GPR158Q5T848 1215 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 TMEM236Q5W0B7 351 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 PKN3Q6P5Z2 889 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 EDEM1Q92611 657 aa9.65□□□□□ -0.87
PTPRA-202ENST00000318266 ZUFSPQ96AP4 578 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms