RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 TMCC2O75069 709 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RAP2AP10114 183 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 NR2C1P13056 603 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ARMC12Q5T9G4 340 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ZNF783Q6ZMS7 281 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 BEND5Q7L4P6 421 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SLC29A3Q9BZD2 475 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 R3HDM2Q9Y2K5 976 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 RALGAPA2Q2PPJ7 1873 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 HEATR5BQ9P2D3 2071 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 TAF1LQ8IZX4 1826 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SLC2A4P14672 509 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 UGT2B15P54855 530 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 USP39Q53GS9 565 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 OVOS1Q6IE37 1185 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 C6orf89Q6UWU4 347 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 FAM220AQ7Z4H9 259 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 GLT1D1Q96MS3 346 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 EXOSC4Q9NPD3 245 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 NECTIN3Q9NQS3 549 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ZDHHC18Q9NUE0 388 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SPTBP11277 2137 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 DNAJB6O75190 326 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ESR1P03372 595 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 VBP1P61758 197 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 KCNJ2P63252 427 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 DDI2Q5TDH0 399 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 GLT6D1Q7Z4J2 308 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 B3GALNT2Q8NCR0 500 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 C12orf42Q96LP6 360 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 CPXM1Q96SM3 734 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 PCDH18Q9HCL0 1135 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 EURLQ9NYK6 297 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 CNTN6Q9UQ52 1028 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ROBO1Q9Y6N7 1651 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 CLDN11O75508 207 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 VNN2O95498 520 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ENDOUP21128 410 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 CCNFP41002 786 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RPL13AP3Q6NVV1 102 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SPRTNQ9H040 489 aaPredicted RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 GTF2IRD1Q9UHL9 959 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 DOCK4Q8N1I0 1966 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RPTORQ8N122 1335 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 PLXNA1Q9UIW2 1896 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 A0A087X0B3 334 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SYN3O14994 580 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 DENRO43583 198 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 TSPAN1O60635 241 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RGS20O76081 388 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 B3GAT3O94766 335 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SEC24DO94855 1032 aaPredicted RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 IFNA16P05015 189 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RHOCP08134 193 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SPATA31C1P0DKV0 1188 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 NCF1P14598 390 aaPredicted RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 AP1S2P56377 157 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 AP1S1P61966 158 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 KCNC3Q14003 757 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ELOAQ14241 798 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 GDPGP1Q6ZNW5 385 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RAB43Q86YS6 212 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 TMC8Q8IU68 726 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 FBXO22Q8NEZ5 403 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ALG3Q92685 438 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 EXD2Q9NVH0 621 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 DNMT3LQ9UJW3 386 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 REXO2Q9Y3B8 237 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 NHSQ6T4R5 1651 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 WDR27A2RRH5 827 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 PRRG1O14668 218 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 ANXA8P13928 327 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 MYL9P24844 172 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 GRIK3Q13003 919 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 CACTIN-AS1Q8N1I8 211 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 CCDC185Q8N715 623 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 SERAC1Q96JX3 654 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 RAB11FIP5Q9BXF6 653 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 CDHR5Q9HBB8 845 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 THG1LQ9NWX6 298 aaKnown RBP8.82□□□□□ -1
COL6A5-202ENST00000312481 B3GNT3Q9Y2A9 372 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 GMPPBQ9Y5P6 360 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 FADS3Q9Y5Q0 445 aa8.82□□□□□ -1
COL6A5-202ENST00000312481 KERAO60938 352 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 JCHAINP01591 159 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ENO2P09104 434 aaPredicted RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 COL6A1P12109 1028 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ZNF24P17028 368 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ETV6P41212 452 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ATP1A4Q13733 1029 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 ADGRD2Q7Z7M1 963 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 TMEM110Q86TL2 294 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 CDC26Q8NHZ8 85 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 SDCBP2Q9H190 292 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 LIMD1Q9UGP4 676 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 NOCTQ9UK39 431 aaKnown RBP8.81□□□□□ -1
COL6A5-202ENST00000312481 FAM234BA2RU67 622 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 PAX7P23759 505 aa8.81□□□□□ -1
COL6A5-202ENST00000312481 FGD2Q7Z6J4 655 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms