RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 SLC24A5Q71RS6 500 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 RETREG3Q86VR2 466 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 CNBD2Q96M20 576 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 NSUN5Q96P11 429 aaKnown RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 TRIB3Q96RU7 358 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 AARSD1Q9BTE6 412 aaKnown RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 SLC2A11Q9BYW1 496 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 CCSER2Q9H7U1 834 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 AKTIPQ9H8T0 292 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 MRPL40Q9NQ50 206 aaKnown RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 SLC27A5Q9Y2P5 690 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 SYN3O14994 580 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 OR6B1O95007 311 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 PGM3O95394 542 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 ZNF26P17031 533 aaPredicted RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 ZNF37AP17032 561 aaPredicted RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 OGNP20774 298 aaKnown RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 OR1E1P30953 314 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 ACADVLP49748 655 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 ARPP19P56211 112 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 PRKCZQ05513 592 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 MRNIPQ6NTE8 343 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 PHYKPLQ8IUZ5 450 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 CLYBLQ8N0X4 340 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 NAT14Q8WUY8 206 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 PEX13Q92968 403 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 ATOH8Q96SQ7 321 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 SLC39A3Q9BRY0 314 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 POPDC3Q9HBV1 291 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 SPAG4Q9NPE6 437 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 TLR8Q9NR97 1041 aaKnown RBP15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 CATSPERZQ9NTU4 200 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 EPS15L1Q9UBC2 864 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 IKZF3Q9UKT9 509 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 AP4S1Q9Y587 144 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 DNAJC15Q9Y5T4 150 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 GREB1Q4ZG55 1949 aa15.2■□□□□ 0.02
SPIRE1-201ENST00000309836 RTN3O95197 1032 aaPredicted RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 EPOP01588 193 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 HOXD9P28356 352 aaPredicted RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 HSPA13P48723 471 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 STC1P52823 247 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 FOXA1P55317 472 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 CAP1Q01518 475 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 RHDQ02161 417 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 RING1Q06587 406 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 GRB7Q14451 532 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 TYSND1Q2T9J0 566 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 SETMARQ53H47 684 aaPredicted RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 SAMD4BQ5PRF9 694 aaKnown RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 KANK2Q63ZY3 851 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 ALG1LQ6GMV1 187 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 RSPO2Q6UXX9 243 aaPredicted RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 LGI2Q8N0V4 545 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 AHI1Q8N157 1196 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 CFAP52Q8N1V2 620 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 OR4L1Q8NH43 312 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 BRSK1Q8TDC3 778 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 LRTOMTQ8WZ04 291 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 DUS3LQ96G46 650 aaKnown RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 PRICKLE1Q96MT3 831 aaPredicted RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 EPB41L1Q9H4G0 881 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 ZNF696Q9H7X3 374 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 CNOT11Q9UKZ1 510 aaKnown RBP15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 RIMKLBQ9ULI2 386 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 SPO11Q9Y5K1 396 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 SLC4A7Q9Y6M7 1214 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 TANC1Q9C0D5 1861 aa15.19■□□□□ 0.02
SPIRE1-201ENST00000309836 A0A0D9SEW6 157 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 MYOCOSA0A1B0GUC4 107 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 MTMR11A4FU01 709 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 OR6C75A6NL08 312 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 KIF3CO14782 793 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 AZIN1O14977 448 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 PIP5K1BO14986 540 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 FGF4P08620 206 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 ETS2P15036 469 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 HOXB8P17481 243 aaPredicted RBP15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 KCNQ1P51787 676 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 SLC7A2P52569 658 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 ZNF140P52738 457 aaPredicted RBP15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 NME5P56597 212 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 LAMB3Q13751 1172 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 PFKFB4Q16877 469 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 PITRM1Q5JRX3 1037 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 IL31Q6EBC2 164 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 TWIST2Q8WVJ9 160 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 LRCH3Q96II8 777 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 KCNA7Q96RP8 456 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 UHRF1Q96T88 793 aaPredicted RBP15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 SH3GL3Q99963 347 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 GPR62Q9BZJ7 368 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 SEMA6AQ9H2E6 1030 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 TUBB1Q9H4B7 451 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 TFB2MQ9H5Q4 396 aaKnown RBP15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 MID1IP1Q9NPA3 183 aa15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 CNOT6Q9ULM6 557 aaKnown RBP15.18■□□□□ 0.02
SPIRE1-201ENST00000309836 MED16Q9Y2X0 877 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms