RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CAMK1DQ8IU85 385 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 TRIM59Q8IWR1 403 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 GALNT6Q8NCL4 622 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 PTCD2Q8WV60 388 aaKnown RBP11.8□□□□□ -0.52
SMIM4-201ENST00000307106 NCSTNQ92542 709 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 TBC1D31Q96DN5 1066 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 TEX101Q9BY14 249 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 FRMD8Q9BZ67 464 aaPredicted RBP11.8□□□□□ -0.52
SMIM4-201ENST00000307106 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 GOLPH3LQ9H4A5 285 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 NOL6Q9H6R4 1146 aaKnown RBP11.8□□□□□ -0.52
SMIM4-201ENST00000307106 LUZP4Q9P127 313 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 KLHL3Q9UH77 587 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 SLC5A6Q9Y289 635 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 CSMD2Q7Z408 3487 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 ZFHX3Q15911 3703 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
SMIM4-201ENST00000307106 FER1L5A0AVI2 2057 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 PIKFYVEQ9Y2I7 2098 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 TRBV23OR9-2A0A075B6M9 112 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 A8MX80 341 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 ADRA1BP35368 520 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 GABRB2P47870 512 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 ATP11AP98196 1134 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 FOXM1Q08050 763 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 RAB6CQ53S08 254 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 AFMIDQ63HM1 303 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 LYSMD3Q7Z3D4 306 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 PHLDB2Q86SQ0 1253 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 XYLT1Q86Y38 959 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 TP53INP2Q8IXH6 220 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 PAF1Q8N7H5 531 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 SLC37A2Q8TED4 501 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 SHC3Q92529 594 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 NUS1Q96E22 293 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 STAMBPL1Q96FJ0 436 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 TUBGCP5Q96RT8 1024 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 MAGEB5Q9BZ81 275 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 RAB6CQ9H0N0 254 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 SLAMF7Q9NQ25 335 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 SIDT1Q9NXL6 827 aaKnown RBP11.79□□□□□ -0.52
SMIM4-201ENST00000307106 PLEKHM1Q9Y4G2 1056 aa11.79□□□□□ -0.52
SMIM4-201ENST00000307106 PCDHGA9Q9Y5G4 932 aaKnown RBP11.79□□□□□ -0.52
SMIM4-201ENST00000307106 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMIM4-201ENST00000307106 FAM170AA1A519 330 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 GOLGA8SH3BPF8 625 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 HNRNPRO43390 633 aaKnown RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 RECKO95980 971 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 IVLP07476 585 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 PRF1P14222 555 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 SERPINA4P29622 427 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CASP14P31944 242 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 MAPK9P45984 424 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 LEPRP48357 1165 aaKnown RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 POLD2P49005 469 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CDK3Q00526 305 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CHAF1BQ13112 559 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 STIM1Q13586 685 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 DNASE1L3Q13609 305 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CDO1Q16878 200 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CPZQ66K79 652 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 JMJD6Q6NYC1 403 aaPredicted RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 DPPA4Q7L190 304 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 ZC3H18Q86VM9 953 aaKnown RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 Q8NA96 180 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 TMEM35BQ8NCS4 154 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 SCAND2PQ9GZW5 306 aaPredicted RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 ATP13A3Q9H7F0 1226 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 MLXIPLQ9NP71 852 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 UBA2Q9UBT2 640 aaPredicted RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 SLC17A4Q9Y2C5 497 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 PCDHGA6Q9Y5G7 932 aa11.78□□□□□ -0.52
SMIM4-201ENST00000307106 SETD2Q9BYW2 2564 aaPredicted RBP11.78□□□□□ -0.52
SMIM4-201ENST00000307106 CCDC88CQ9P219 2028 aa11.77□□□□□ -0.52
SMIM4-201ENST00000307106 PDZD2O15018 2839 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 ARHGAP10A1A4S6 786 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 GOLGA6CA6NDK9 693 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 GOLGA6BA6NDN3 693 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 LRCH4O75427 683 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 KIAA0754O94854 1291 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 NDUFA10O95299 355 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 PLEKP08567 350 aaPredicted RBP11.77□□□□□ -0.53
SMIM4-201ENST00000307106 CCNYL3P0C7X3 344 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 GOLGA6DP0CG33 693 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 MARSP56192 900 aaKnown RBP11.77□□□□□ -0.53
SMIM4-201ENST00000307106 YBEYP58557 167 aaPredicted RBP11.77□□□□□ -0.53
SMIM4-201ENST00000307106 KRT85P78386 507 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 APBA1Q02410 837 aa11.77□□□□□ -0.53
SMIM4-201ENST00000307106 HHEXQ03014 270 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms