RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GNG14A0A1W2PPG7 69 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 UBXN8O00124 270 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 TREHO43280 583 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 SORBS2O94875 1100 aaKnown RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 SLC7A1P30825 629 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 DEFB115Q30KQ5 88 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 FAM117BQ6P1L5 589 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 C16orf59Q7L2K0 433 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 NECAB2Q7Z6G3 386 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 PTCD2Q8WV60 388 aaKnown RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 LINGO1Q96FE5 620 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 ZNHIT2Q9UHR6 403 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 TNPO3Q9Y5L0 923 aaKnown RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 MATN3O15232 486 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 SLC22A2O15244 555 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 RECQL5O94762 991 aaPredicted RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 ANXA6P08133 673 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 ABCB1P08183 1280 aaPredicted RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 POLD2P49005 469 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 CLEC20AQ6ZU45 233 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 RNF180Q86T96 592 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 TMEM132CQ8N3T6 1108 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 STX19Q8N4C7 294 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 SVOPQ8N4V2 548 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 ESAMQ96AP7 390 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 OSBPL6Q9BZF3 934 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 ZBTB26Q9HCK0 441 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 SELENONQ9NZV5 590 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 MOSPD1Q9UJG1 213 aa13.28□□□□□ -0.28
DDX54-201ENST00000306014 TDRKHQ9Y2W6 561 aaKnown RBP13.28□□□□□ -0.28
DDX54-201ENST00000306014 H3BMM5 538 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 SERPIND1P05546 499 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 ZBTB48P10074 688 aaPredicted RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 MBL2P11226 248 aaPredicted RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 CLCNKBP51801 687 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 ATP6V0D1P61421 351 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 ILF2Q12905 390 aaKnown RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 SH3BP4Q9P0V3 963 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 MGAT4DA6NG13 374 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 CNOT3O75175 753 aaKnown RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 OR4Q2P0C623 313 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 CCR3P51677 355 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 PITX1P78337 314 aaPredicted RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 ITGA7Q13683 1181 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 C11orf74Q86VG3 221 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 FCRL3Q96P31 734 aaPredicted RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 TRPM5Q9NZQ8 1165 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 SLC2A6Q9UGQ3 507 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 CNOT6Q9ULM6 557 aaKnown RBP13.27□□□□□ -0.28
DDX54-201ENST00000306014 TBC1D30Q9Y2I9 924 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 SH3BP1Q9Y3L3 701 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 DGKBQ9Y6T7 804 aa13.27□□□□□ -0.28
DDX54-201ENST00000306014 NPEPPSL1A6NEC2 478 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 ULK1O75385 1050 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 CDH3P22223 829 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 PIK3CGP48736 1102 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 PWP1Q13610 501 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 BOP1Q14137 746 aaKnown RBP13.27□□□□□ -0.29
DDX54-201ENST00000306014 HERC3Q15034 1050 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 TSTD2Q5T7W7 516 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 OR8H2Q8N162 312 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 CRYBG2Q8N1P7 616 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 OR2T12Q8NG77 320 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 GPR22Q99680 433 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 SLC39A8Q9C0K1 460 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 POLR3HQ9Y535 204 aaPredicted RBP13.27□□□□□ -0.29
DDX54-201ENST00000306014 LOC100506127A0A0U1RQW1 187 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 SMIM35A0A1B0GVV1 85 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 E9PAM4 449 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.29
DDX54-201ENST00000306014 SIX3O95343 332 aaPredicted RBP13.27□□□□□ -0.29
DDX54-201ENST00000306014 FGF1P05230 155 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 ALOX12P18054 663 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 POLR2JP52435 117 aaKnown RBP13.27□□□□□ -0.29
DDX54-201ENST00000306014 CLCQ05315 142 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 TLR1Q15399 786 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 AFTPHQ6ULP2 937 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 GPR142Q7Z601 462 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 CFAP52Q8N1V2 620 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 SELENOMQ8WWX9 145 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 FAM126AQ9BYI3 521 aaPredicted RBP13.27□□□□□ -0.29
DDX54-201ENST00000306014 RNF39Q9H2S5 420 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 ARMC7Q9H6L4 198 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 ARL15Q9NXU5 204 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 PCDHB7Q9Y5E2 793 aa13.27□□□□□ -0.29
DDX54-201ENST00000306014 A0A1W2PQH9 124 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 EI24O14681 340 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 ZBTB14O43829 449 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 BCAS2O75934 225 aaPredicted RBP13.26□□□□□ -0.29
DDX54-201ENST00000306014 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
DDX54-201ENST00000306014 MTHFD1P11586 935 aaKnown RBP13.26□□□□□ -0.29
DDX54-201ENST00000306014 CYP4B1P13584 511 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 JAK1P23458 1154 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 SOX6P35712 828 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 TTPAP49638 278 aa13.26□□□□□ -0.29
DDX54-201ENST00000306014 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
DDX54-201ENST00000306014 NOGQ13253 232 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms