RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ABCA7Q8IZY2 2146 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 C10orf142B7Z368 130 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 NMBRP28336 390 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 TMPRSS15P98073 1019 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 FGL2Q14314 439 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 NEK5Q6P3R8 708 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 OR13J1Q8NGT2 312 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 MFSD3Q96ES6 412 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 MRM3Q9HC36 420 aaKnown RBP27.1■■□□□ 1.93
HDAC3-201ENST00000305264 CD84Q9UIB8 345 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 PKP3Q9Y446 797 aa27.1■■□□□ 1.93
HDAC3-201ENST00000305264 STX7O15400 261 aaKnown RBP27.09■■□□□ 1.93
HDAC3-201ENST00000305264 SPINT3P49223 89 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 PDE1BQ01064 536 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 ZNF284Q2VY69 593 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 TRIM69Q86WT6 500 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 C1QTNF1Q9BXJ1 281 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 PLAC1Q9HBJ0 212 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 RAB21Q9UL25 225 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 LZTS3O60299 673 aaPredicted RBP27.09■■□□□ 1.93
HDAC3-201ENST00000305264 TM7SF2O76062 418 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 RECQL5O94762 991 aaPredicted RBP27.09■■□□□ 1.93
HDAC3-201ENST00000305264 BPIP17213 487 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 SRSF5Q13243 272 aaKnown RBP27.09■■□□□ 1.93
HDAC3-201ENST00000305264 ESRP1Q6NXG1 681 aaKnown RBP27.09■■□□□ 1.93
HDAC3-201ENST00000305264 TECPR1Q7Z6L1 1165 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 STYXQ8WUJ0 223 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 NELL1Q92832 810 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 TREX1Q9NSU2 369 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 PKD2L2Q9NZM6 624 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 FNDC3AQ9Y2H6 1198 aaKnown RBP27.09■■□□□ 1.93
HDAC3-201ENST00000305264 CEP192Q8TEP8 1941 aa27.09■■□□□ 1.93
HDAC3-201ENST00000305264 FAM237BA0A1B0GVD1 139 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 NDUFS2O75306 463 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 PGAM1P18669 254 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 ARSDP51689 593 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 LAMB3Q13751 1172 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 GPR26Q8NDV2 337 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 ZNF669Q96BR6 464 aaPredicted RBP27.08■■□□□ 1.93
HDAC3-201ENST00000305264 DTD2Q96FN9 168 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 CFAP36Q96G28 342 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 C9orf72Q96LT7 481 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 FCRL3Q96P31 734 aaPredicted RBP27.08■■□□□ 1.93
HDAC3-201ENST00000305264 NLE1Q9NVX2 485 aaPredicted RBP27.08■■□□□ 1.93
HDAC3-201ENST00000305264 ZC3H7BQ9UGR2 993 aaKnown RBP27.08■■□□□ 1.93
HDAC3-201ENST00000305264 RPS6KL1Q9Y6S9 549 aa27.08■■□□□ 1.93
HDAC3-201ENST00000305264 WNT9AO14904 365 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 IGHV4-34P06331 123 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 SP9P0CG40 484 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 MAGEA4P43358 317 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 RPL6Q02878 288 aaKnown RBP27.08■■□□□ 1.92
HDAC3-201ENST00000305264 NLRP9Q7RTR0 991 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 TMEM135Q86UB9 458 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 DEFB119Q8N690 84 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 C1QTNF2Q9BXJ5 285 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 FKBPLQ9UIM3 349 aa27.08■■□□□ 1.92
HDAC3-201ENST00000305264 MAGEB16A2A368 324 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 GALR2O43603 387 aaPredicted RBP27.07■■□□□ 1.92
HDAC3-201ENST00000305264 CREB5Q02930 508 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 ZNF528Q3MIS6 628 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 ANKRD20A4Q4UJ75 823 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 ARMC3Q5W041 872 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 ALS2CLQ60I27 953 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 KIAA0895LQ68EN5 471 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 PYROXD1Q8WU10 500 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 NUS1Q96E22 293 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 FAM126AQ9BYI3 521 aaPredicted RBP27.07■■□□□ 1.92
HDAC3-201ENST00000305264 TSPYL1Q9H0U9 437 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 RIMKLBQ9ULI2 386 aa27.07■■□□□ 1.92
HDAC3-201ENST00000305264 FSBPO95073 299 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 MCM3P25205 808 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 ACVR1Q04771 509 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 CRYMQ14894 314 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 SKIDA1Q1XH10 827 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 UNC5AQ6ZN44 842 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 SCAMP4Q969E2 229 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 NAT9Q9BTE0 207 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 SLC17A9Q9BYT1 436 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 SUDS3Q9H7L9 328 aaPredicted RBP27.06■■□□□ 1.92
HDAC3-201ENST00000305264 VPS13AQ96RL7 3174 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 LATO43561 262 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 RPP40O75818 363 aaKnown RBP27.06■■□□□ 1.92
HDAC3-201ENST00000305264 USP1O94782 785 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 PAK4O96013 591 aaPredicted RBP27.06■■□□□ 1.92
HDAC3-201ENST00000305264 PSMA3P25788 255 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 SMAD1Q15797 465 aaKnown RBP27.06■■□□□ 1.92
HDAC3-201ENST00000305264 UBAP2Q5T6F2 1119 aaKnown RBP27.06■■□□□ 1.92
HDAC3-201ENST00000305264 SLC36A4Q6YBV0 504 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 CAPN12Q6ZSI9 719 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 CYP2U1Q7Z449 544 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 PEX13Q92968 403 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 BIRC7Q96CA5 298 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 TBATAQ96M53 351 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 LRFN3Q9BTN0 628 aa27.06■■□□□ 1.92
HDAC3-201ENST00000305264 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.06■■□□□ 1.92
HDAC3-201ENST00000305264 ZCWPW2A0A1B0GU75 182 aa27.05■■□□□ 1.92
HDAC3-201ENST00000305264 GAB3Q8WWW8 586 aa27.05■■□□□ 1.92
HDAC3-201ENST00000305264 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.05■■□□□ 1.921e-6■■■■■ 48.1
HDAC3-201ENST00000305264 ABCG8Q9H221 673 aa27.05■■□□□ 1.92
HDAC3-201ENST00000305264 EBF2Q9HAK2 575 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms