RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PROB1E7EW31 1015 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 FPGTO14772 594 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 SESN2P58004 480 aaPredicted RBP24.44■■□□□ 1.5
HOXC9-201ENST00000303450 PDE1BQ01064 536 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 IRF4Q15306 451 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 CERCAMQ5T4B2 595 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 PEAR1Q5VY43 1037 aaPredicted RBP24.44■■□□□ 1.5
HOXC9-201ENST00000303450 RFLNAQ6ZTI6 216 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 RABEPKQ7Z6M1 372 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 NRSN1Q8IZ57 195 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 TMEM145Q8NBT3 493 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 NOA1Q8NC60 698 aaKnown RBP24.44■■□□□ 1.5
HOXC9-201ENST00000303450 MCUQ8NE86 351 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 LRRC1Q9BTT6 524 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 RAB17Q9H0T7 212 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 L2HGDHQ9H9P8 463 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 MBNL1Q9NR56 388 aaKnown RBP24.44■■□□□ 1.5
HOXC9-201ENST00000303450 SNX24Q9Y343 169 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 PKP3Q9Y446 797 aa24.44■■□□□ 1.5
HOXC9-201ENST00000303450 GOLGA8MH3BSY2 632 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 LPOP22079 712 aaPredicted RBP24.43■■□□□ 1.5
HOXC9-201ENST00000303450 MPLP40238 635 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 AFF3P51826 1226 aaKnown RBP24.43■■□□□ 1.5
HOXC9-201ENST00000303450 CLDN2P57739 230 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 SEPT6Q14141 434 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 HOOK3Q86VS8 718 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 CEP76Q8TAP6 659 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 AP2M1Q96CW1 435 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 XAB2Q9HCS7 855 aaKnown RBP24.43■■□□□ 1.5
HOXC9-201ENST00000303450 BPIFA1Q9NP55 256 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 RAD18Q9NS91 495 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 BFARQ9NZS9 450 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 NCDNQ9UBB6 729 aa24.43■■□□□ 1.5
HOXC9-201ENST00000303450 PI4KAP42356 2102 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 STX7O15400 261 aaKnown RBP24.42■■□□□ 1.5
HOXC9-201ENST00000303450 BUD23O43709 281 aaKnown RBP24.42■■□□□ 1.5
HOXC9-201ENST00000303450 SEC31AO94979 1220 aaKnown RBP24.42■■□□□ 1.5
HOXC9-201ENST00000303450 PCCBP05166 539 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 CD38P28907 300 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 MORF4L2Q15014 288 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 DUOXA1Q1HG43 343 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 ZNF534Q76KX8 674 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 ABCG8Q9H221 673 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 DPH5Q9H2P9 285 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 FAM83DQ9H4H8 585 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 IL17CQ9P0M4 197 aa24.42■■□□□ 1.5
HOXC9-201ENST00000303450 H0Y8X5 98 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 NDC80O14777 642 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 MLNP12872 115 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 IGFALSP35858 605 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 RPL21P46778 160 aaKnown RBP24.41■■□□□ 1.5
HOXC9-201ENST00000303450 NPY2RP49146 381 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 LAMB3Q13751 1172 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 TEAD4Q15561 434 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 GCNT7Q6ZNI0 430 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 ZNF765Q7L2R6 523 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 BBOF1Q8ND07 529 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 SCAMP4Q969E2 229 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 PHOX2BQ99453 314 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 CDH19Q9H159 772 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 ANAPC5Q9UJX4 755 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 KCTD3Q9Y597 815 aa24.41■■□□□ 1.5
HOXC9-201ENST00000303450 POM121BA6NF01 834 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 A6NNZ2 444 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 SMAPO00193 183 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 LDB2O43679 373 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 PPFIA2O75334 1257 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 CFIP05156 583 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 BPIP17213 487 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 CSNK1EP49674 416 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 ITGA8P53708 1063 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 SLC7A5Q01650 507 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 DPTQ07507 201 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 CALCOCO2Q13137 446 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 MTM1Q13496 603 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 INPP5AQ14642 412 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 CCDC6Q16204 474 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 CCDC38Q502W7 563 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 DUPD1Q68J44 220 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 ESRP1Q6NXG1 681 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 CAND1Q86VP6 1230 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 MFSD2AQ8NA29 543 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 OR4K2Q8NGD2 314 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 FAM174AQ8TBP5 190 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 SKA1Q96BD8 255 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 BMFQ96LC9 184 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 SERPINB12Q96P63 405 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 RIOK2Q9BVS4 552 aaKnown RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 IL22Q9GZX6 179 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 RALGAPA1Q6GYQ0 2036 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 MYLKQ15746 1914 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 HEATR9A2RTY3 570 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 AVILO75366 819 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 ADRA1DP25100 572 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 MGAT1P26572 445 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 ZDHHC20Q5W0Z9 365 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 ALS2CLQ60I27 953 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 RAET1GQ6H3X3 334 aa24.4■■□□□ 1.5
HOXC9-201ENST00000303450 HIBCHQ6NVY1 386 aaPredicted RBP24.4■■□□□ 1.5
HOXC9-201ENST00000303450 PNCKQ6P2M8 343 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms