RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 DIP2CQ9Y2E4 1556 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 MYL12BO14950 172 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 TRIM13O60858 407 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 APLP1P51693 650 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SLC25A3Q00325 362 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 RIN1Q13671 783 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SMU1Q2TAY7 513 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SRLQ86TD4 932 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PACS2Q86VP3 889 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 RALGPS2Q86X27 583 aaPredicted RBP7.8□□□□□ -1.16
SCN9A-201ENST00000303354 DHFR2Q86XF0 187 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 SAMD3Q8N6K7 520 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF611Q8N823 705 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PYDC1Q8WXC3 89 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 VPS33AQ96AX1 596 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 COPS8Q99627 209 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 RHBDL2Q9NX52 303 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PROCP04070 461 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 IDSP22304 550 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 MSX1P28360 303 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 PANX1Q96RD7 426 aa7.8□□□□□ -1.16
SCN9A-201ENST00000303354 KPNA4O00629 521 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SHOX2O60902 331 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 H2AFXP16104 143 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MAGEA10P43363 369 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 HK2P52789 917 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 WNT3AP56704 352 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FGF10O15520 208 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 DRG2P55039 364 aaKnown RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 RFX4Q33E94 735 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 COLEC12Q5KU26 742 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 OR2AG1Q9H205 316 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 PRDM16Q9HAZ2 1276 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 A0A0J9YVX5 310 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 A0A1W2PPM1 405 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 BCLAF3A2AJT9 711 aaKnown RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MFSD11O43934 449 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SDC3O75056 442 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TM7SF2O76062 418 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FCER2P06734 321 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ALOX12P18054 663 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MYL12AP19105 171 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ADRA1DP25100 572 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MLLT3P42568 568 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 PTPN9P43378 593 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GTF2BQ00403 316 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FMO1Q01740 532 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CREB5Q02930 508 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ST3GAL1Q11201 340 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 XKR4Q5GH76 650 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TCEAL5Q5H9L2 206 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FAM91A1Q658Y4 838 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 EIF3MQ7L2H7 374 aaKnown RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CCNJLQ8IV13 435 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 STAG3L4Q8TBR4 150 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 P2RY11Q96G91 374 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GPER1Q99527 375 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GANQ9H2C0 597 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 IL36AQ9UHA7 158 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CHRM5P08912 532 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GIMD1P0DJR0 217 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF143P52747 638 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GAD2Q05329 585 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MAD2L1Q13257 205 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MON1AQ86VX9 555 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 EPS8L1Q8TE68 723 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SLC25A36Q96CQ1 311 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 UHRF1Q96T88 793 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 RNF39Q9H2S5 420 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 PNPOQ9NVS9 261 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 EIF1AXP47813 144 aaKnown RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FKBP1AP62942 108 aaKnown RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 USP4Q13107 963 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CAMK1Q14012 370 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TIGD5Q53EQ6 642 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GPR141Q7Z602 305 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 NLGN4YQ8NFZ3 816 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CERS2Q96G23 380 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CPXM1Q96SM3 734 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SLITRK2Q9H156 845 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 FZD3Q9NPG1 666 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SH3BGRL2Q9UJC5 107 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 OR6C75A6NL08 312 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 SNTNA6NMZ2 147 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 UBOX5O94941 541 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 MRPS22P82650 360 aaKnown RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ZNF544Q6NX49 715 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TSHZ1Q6ZSZ6 1077 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 ATL1Q8WXF7 558 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 APBB2Q92870 758 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TBATAQ96M53 351 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 CDK15Q96Q40 435 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 NPAS2Q99743 824 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 KCNN2Q9H2S1 579 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 BRD7Q9NPI1 651 aa7.79□□□□□ -1.16
SCN9A-201ENST00000303354 TRIM3O75382 744 aaPredicted RBP7.79□□□□□ -1.16
SCN9A-201ENST00000303354 GZMAP12544 262 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms