RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 SNAP91O60641 907 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 EOMESO95936 686 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 SELPP16109 830 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 RHOQP17081 205 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ATF6P18850 670 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 RPL10P27635 214 aaKnown RBP10.11□□□□□ -0.79
FOXN4-201ENST00000299162 KCNC1P48547 511 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CD97P48960 835 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 HNRNPDQ14103 355 aaKnown RBP10.11□□□□□ -0.79
FOXN4-201ENST00000299162 TLR1Q15399 786 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 DEFB115Q30KQ5 88 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 TSTD2Q5T7W7 516 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 HECTD2Q5U5R9 776 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 GRAMD4Q6IC98 578 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ZYG11AQ6WRX3 759 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 GK5Q6ZS86 529 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 PDSS2Q86YH6 399 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 FBXO22Q8NEZ5 403 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 OR13J1Q8NGT2 312 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CDRT15Q96T59 188 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 MRPL46Q9H2W6 279 aaKnown RBP10.11□□□□□ -0.79
FOXN4-201ENST00000299162 FBRSL1Q9HCM7 1045 aaKnown RBP10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ATP13A1Q9HD20 1204 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 MARCH5Q9NX47 278 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ADA2Q9NZK5 511 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CDYLQ9Y232 598 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 TRPM7Q96QT4 1865 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 A0A088AWK7 358 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 C2orf78A6NCI8 922 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ZNF195O14628 629 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 HDAC3O15379 428 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 GOT2P00505 430 aaKnown RBP10.11□□□□□ -0.79
FOXN4-201ENST00000299162 IGHA2P01877 340 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 GALTP07902 379 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 SLC2A3P11169 496 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 PIK3R1P27986 724 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 HARS2P49590 506 aaKnown RBP10.11□□□□□ -0.79
FOXN4-201ENST00000299162 MTTPP55157 894 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ART3Q13508 389 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 IRF5Q13568 498 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ATP1A4Q13733 1029 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 PFKFB4Q16877 469 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 FAM83EQ2M2I3 478 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 MYLK3Q32MK0 819 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 DNAL1Q4LDG9 190 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CMPK2Q5EBM0 449 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 KLC3Q6P597 504 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 RNF111Q6ZNA4 994 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CARNMT1Q8N4J0 409 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 OR9I1Q8NGQ6 314 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CMTM5Q96DZ9 223 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 HBEGFQ99075 208 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 TTPALQ9BTX7 342 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 C1QTNF1Q9BXJ1 281 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 ARMC7Q9H6L4 198 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 PRM3Q9NNZ6 103 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
FOXN4-201ENST00000299162 CCDC162PA2VCL2 907 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 GPC4O75487 556 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 PABPC4LP0CB38 370 aaKnown RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 GJA1P17302 382 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CTPS1P17812 591 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 ITGAXP20702 1163 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CRABP2P29373 138 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 GKP32189 559 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 ADRA1AP35348 466 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 NOGQ13253 232 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 TRAF7Q6Q0C0 670 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 KDELC1Q6UW63 502 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CLEC14AQ86T13 490 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 OR4K2Q8NGD2 314 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 IMP4Q96G21 291 aaKnown RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 SLC39A13Q96H72 371 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 TRIM8Q9BZR9 551 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 VWA7Q9Y334 891 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 SLC38A8A6NNN8 435 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 PRRG1O14668 218 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 PSMD3O43242 534 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 PEX11BO96011 259 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CDK4P11802 303 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 GFAPP14136 432 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CORO1AP31146 461 aaKnown RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 ATP5C1P36542 298 aaKnown RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 HADHAP40939 763 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 ALDH1A3P47895 512 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CDK18Q07002 472 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 DCTN2Q13561 401 aaKnown RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 FSCBQ5H9T9 825 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 PITRM1Q5JRX3 1037 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 EPGNQ6UW88 154 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 DDIASQ8IXT1 998 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 SLC43A3Q8NBI5 491 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 DPF3Q92784 378 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 TMIGD2Q96BF3 282 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 SLC39A3Q9BRY0 314 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CINPQ9BW66 212 aaPredicted RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 POLR1EQ9GZS1 481 aaKnown RBP10.1□□□□□ -0.79
FOXN4-201ENST00000299162 UNC93B1Q9H1C4 597 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 CDH22Q9UJ99 828 aa10.1□□□□□ -0.79
FOXN4-201ENST00000299162 RAP2CQ9Y3L5 183 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms