RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 RFTN1Q14699 578 aaPredicted RBP12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 TMEM126BQ8IUX1 230 aa12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 NAA50Q9GZZ1 169 aaKnown RBP12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 AP5M1Q9H0R1 490 aa12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 ALG2Q9H553 416 aa12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 SMPD3Q9NY59 655 aaPredicted RBP12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 U3KQV3 271 aa12.58□□□□□ -0.4
TMEM200A-201ENST00000296978 CFAP99D6REC4 459 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 BTN3A1O00481 513 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 NME4O00746 187 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 AARS2Q5JTZ9 985 aaKnown RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 ANKS6Q68DC2 871 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 TIGD7Q6NT04 549 aaPredicted RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SEPT8Q92599 483 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 B3GALT6Q96L58 329 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 ACOX2Q99424 681 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 MAF1Q9H063 256 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 WDR6Q9NNW5 1121 aaKnown RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 ZNF229Q9UJW7 825 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 ORC6Q9Y5N6 252 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 PIRO00625 290 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 DNAJB2P25686 324 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 OXTRP30559 389 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SCNN1AP37088 669 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 RENBPP51606 427 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 NRG1Q02297 640 aaPredicted RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 TRAP1Q12931 704 aaKnown RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 PMS2P3Q13401 168 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 LRP8Q14114 963 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 DGCR6Q14129 220 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 POLD3Q15054 466 aaPredicted RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 MFSD6LQ8IWD5 586 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 ZNF555Q8NEP9 628 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 HM13Q8TCT9 377 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SKA2Q8WVK7 121 aaPredicted RBP12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 EXOC2Q96KP1 924 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SLC9A7Q96T83 725 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 NDFIP2Q9NV92 336 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 LIMD1Q9UGP4 676 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 M0R3G1 203 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 PPIL2Q13356 520 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 NR6A1Q15406 480 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 TECRLQ5HYJ1 363 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 TSTD2Q5T7W7 516 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SLC15A3Q8IY34 581 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 ARL10Q8N8L6 244 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 GPR152Q8TDT2 470 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 NTAN1Q96AB6 310 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 C16orf70Q9BSU1 422 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 COQ6Q9Y2Z9 468 aa12.57□□□□□ -0.4
TMEM200A-201ENST00000296978 FCGR1AP12314 374 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 SMPD1P17405 629 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 ELK4P28324 431 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 ALDH4A1P30038 563 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 APOFQ13790 326 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 RAB39AQ14964 217 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 PSMD5Q16401 504 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 HMBOX1Q6NT76 420 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 SAPCD2Q86UD0 394 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 RETREG3Q86VR2 466 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 CMTR2Q8IYT2 770 aaKnown RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 TOP6BLQ8N6T0 577 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 ITFG1Q8TB96 612 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 GIPC2Q8TF65 315 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 TMEM40Q8WWA1 233 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 FAM162AQ96A26 154 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 LRRC58Q96CX6 371 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 EGFL8Q99944 293 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 HOPXQ9BPY8 73 aaPredicted RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 HGH1Q9BTY7 390 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 TSC22D4Q9Y3Q8 395 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 I6L893 689 aaPredicted RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 RSL1D1O76021 490 aaKnown RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 ATE1O95260 518 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 MMP3P08254 477 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 OR4Q2P0C623 313 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 CCNCP24863 283 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 GSK3BP49841 420 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 RAD23AP54725 363 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 TXNL4AP83876 142 aaKnown RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 GTF2H3Q13889 308 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 ACAP2Q15057 778 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 TAF2Q6P1X5 1199 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 PRMT9Q6P2P2 845 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 SPESP1Q6UW49 350 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 CIR1Q86X95 450 aaPredicted RBP12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 THEM5Q8N1Q8 247 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 COX4I2Q96KJ9 171 aa12.56□□□□□ -0.4
TMEM200A-201ENST00000296978 FCRL5Q96RD9 977 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms